RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ZNF253O75346 499 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 PITX3O75364 302 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 CCNKO75909 580 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 GPX1P07203 203 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SNRPCP09234 159 aaKnown RBP1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR4E1P0C645 316 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SEC11BP0C7V7 166 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGLC2P0DOY2 106 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 IAPPP10997 89 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC25A6P12236 298 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 CRISP2P16562 243 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 POLR2GP62487 172 aaKnown RBP eCLIP1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 CD300CQ08708 224 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 BTN1A1Q13410 526 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 OPCMLQ14982 345 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 GUK1Q16774 197 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 C14orf177Q52M58 125 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SPANXN5Q5MJ07 72 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 FFAR4Q5NUL3 377 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 TMEM78Q5T7P6 136 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 LELP1Q5T871 98 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 IZUMO2Q6UXV1 221 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 PATE2Q6UY27 113 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC00305Q7Z4B0 112 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 LYZL2Q7Z4W2 148 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 TMEM229BQ8NBD8 167 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR4C5Q8NGB2 326 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR4D10Q8NGI6 311 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR10G4Q8NGN3 311 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR52I2Q8NH67 350 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 ATP6V0E2Q8NHE4 81 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 NRG4Q8WWG1 115 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 MRPL53Q96EL3 112 aaKnown RBP1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SAT2Q96F10 170 aaPredicted RBP1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC00477Q96M19 166 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SCGB3A2Q96PL1 93 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRRT1Q99946 306 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRADC1Q9BSG0 188 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SPXQ9BT56 116 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SRRQ9GZT4 340 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 ARL6Q9H0F7 186 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 AGPAT4-IT1Q9H0P7 198 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 VCX3BQ9H321 246 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 TP53TG3Q9ULZ0 132 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 RPH3ALQ9UNE2 315 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 STRAPQ9Y3F4 350 aaKnown RBP1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 TRGV11A0A075B6L2 103 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGKV2D-24A0A075B6R9 120 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV3-16A0A0C4DH30 117 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 TRBV7-9A0A0J9YWB2 115 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 LOC100131303A0A0U1RQF7 123 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 A0A0U1RQV1 116 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 DUXBA0A1W2PPF3 345 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 ANKRD65E5RJM6 399 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 H3BP45 60 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 H3BQ15 152 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 K7EPK0 472 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 M0R2P5 195 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 M0R3E3 92 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 COX7A2P2O60397 106 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 CIDEAO60543 219 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 HPGDSO60760 199 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR10J4P0C629 311 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 HIST1H1EP10412 219 aaKnown RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 GATA1P15976 413 aaPredicted RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 TGFBR1P36897 503 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 UBE2MP61081 183 aaKnown RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 LSM3P62310 102 aaKnown RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 MRPS10P82664 201 aaKnown RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 SSBP1Q04837 148 aaKnown RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC38A11Q08AI6 406 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 ERCC8Q13216 396 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 RAB31Q13636 194 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 RHOHQ15669 191 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 NEDD8Q15843 81 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 BAK1Q16611 211 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 VWC2Q2TAL6 325 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 MUC21Q5SSG8 566 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 C10orf113Q5VZT2 155 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAAP20Q6NZ36 180 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 MZT2AQ6P582 158 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAM159AQ6UWV7 190 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 Q6ZRG5 221 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZNF546Q86UE3 836 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 CLVS1Q8IUQ0 354 aaPredicted RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZFAND2AQ8N6M9 145 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 YIPF6Q96EC8 236 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAM19A4Q96LR4 140 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 C2orf50Q96LR7 162 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC01600Q96MT4 127 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 GTSF1LQ9H1H1 148 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR51M1Q9H341 326 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 AAMDCQ9H7C9 122 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 NPVFQ9HCQ7 196 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC39A9Q9NUM3 307 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRR13Q9NZ81 148 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 CCDC59Q9P031 241 aaKnown RBP1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZNF492Q9P255 531 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 MGAT4CQ9UBM8 478 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 EXTL2Q9UBQ6 330 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms