RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PRM2P04554 102 aa17.18■□□□□ 0.34
UBE2E3-202ENST00000410062 TPT1P13693 172 aaKnown RBP17.18■□□□□ 0.34
UBE2E3-202ENST00000410062 LEPP41159 167 aa17.18■□□□□ 0.34
UBE2E3-202ENST00000410062 FAM74A1Q5RGS3 127 aa17.18■□□□□ 0.34
UBE2E3-202ENST00000410062 TMEM167BQ9NRX6 74 aa17.18■□□□□ 0.34
UBE2E3-202ENST00000410062 RPH3ALQ9UNE2 315 aa17.18■□□□□ 0.34
UBE2E3-202ENST00000410062 DIRC3C9JPN6 131 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 PMS2P11Q13670 270 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 TMEM78Q5T7P6 136 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 GFI1BQ5VTD9 330 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 C11orf45Q8TAV5 145 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 CMTM2Q8TAZ6 248 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 RXFP4Q8TDU9 374 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 TMED6Q8WW62 240 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 TMPRSS5Q9H3S3 457 aa17.17■□□□□ 0.34
UBE2E3-202ENST00000410062 HBE1P02100 147 aa17.16■□□□□ 0.34
UBE2E3-202ENST00000410062 STOML3Q8TAV4 291 aa17.16■□□□□ 0.34
UBE2E3-202ENST00000410062 MAP1LC3B2A6NCE7 125 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 EMP1P54849 157 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 NANOS2P60321 138 aaKnown RBP17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 ZFP69Q49AA0 526 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 FAM19A4Q96LR4 140 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 LINC01587Q99440 93 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 MAP1LC3BQ9GZQ8 125 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 CXorf65A6NEN9 183 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 ZNF705GA8MUZ8 300 aaPredicted RBP17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 GNG5P63218 68 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 RRN3P1Q2M238 152 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 Q8TAT8 98 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 ZNF492Q9P255 531 aa17.15■□□□□ 0.34
UBE2E3-202ENST00000410062 RBAKDNA6NC62 111 aa17.14■□□□□ 0.33
UBE2E3-202ENST00000410062 UMAD1C9J7I0 102 aa17.14■□□□□ 0.33
UBE2E3-202ENST00000410062 SLC25A5P05141 298 aaKnown RBP17.14■□□□□ 0.33
UBE2E3-202ENST00000410062 FAM213BQ8TBF2 198 aa17.14■□□□□ 0.33
UBE2E3-202ENST00000410062 CELA1Q9UNI1 258 aa17.14■□□□□ 0.33
UBE2E3-202ENST00000410062 TRAV12-3A0A0B4J271 114 aa17.13■□□□□ 0.33
UBE2E3-202ENST00000410062 LOC102723971A0A1B0GUV8 181 aa17.13■□□□□ 0.33
UBE2E3-202ENST00000410062 ZNF138P52744 262 aa17.13■□□□□ 0.33
UBE2E3-202ENST00000410062 GOLT1AQ6ZVE7 132 aa17.13■□□□□ 0.33
UBE2E3-202ENST00000410062 TMEM256Q8N2U0 113 aa17.13■□□□□ 0.33
UBE2E3-202ENST00000410062 C9orf62Q8N4C0 152 aa17.13■□□□□ 0.33
UBE2E3-202ENST00000410062 GGTLC3B5MD39 225 aa17.12■□□□□ 0.33
UBE2E3-202ENST00000410062 HTN1P15515 57 aa17.12■□□□□ 0.33
UBE2E3-202ENST00000410062 SUMO1P63165 101 aaKnown RBP17.12■□□□□ 0.33
UBE2E3-202ENST00000410062 TENM2Q9NT68 2774 aa17.12■□□□□ 0.33
UBE2E3-202ENST00000410062 UBE2G2P60604 165 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 BTN1A1Q13410 526 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 C20orf144Q9BQM9 153 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 TMEM189A5PLL7 270 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 KLLNB2CW77 178 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 CRISP2P16562 243 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 AZU1P20160 251 aa17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 RNASE4P34096 147 aaKnown RBP17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 YTHDF2Q9Y5A9 579 aaKnown RBP17.11■□□□□ 0.33
UBE2E3-202ENST00000410062 A0A1W2PRE2 83 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 C7orf71A4D174 169 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 H7BYZ3 331 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 GPX1P07203 203 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 TAS2R60P59551 318 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 PRR9Q5T870 116 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 SLC51BQ86UW2 128 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 ZFAND2AQ8N6M9 145 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 ARL6IP6Q8N6S5 226 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 C5orf17Q8NAS9 161 aa17.1■□□□□ 0.33
UBE2E3-202ENST00000410062 ZNF767PQ75MW2 155 aa17.09■□□□□ 0.33
UBE2E3-202ENST00000410062 SFT2D1Q8WV19 159 aa17.09■□□□□ 0.33
UBE2E3-202ENST00000410062 TRAV8-1A0A0A6YYK1 113 aa17.08■□□□□ 0.32
UBE2E3-202ENST00000410062 A0A1B0GV50 99 aa17.08■□□□□ 0.32
UBE2E3-202ENST00000410062 DPPA3Q6W0C5 159 aa17.08■□□□□ 0.32
UBE2E3-202ENST00000410062 MBD3L1Q8WWY6 194 aa17.08■□□□□ 0.32
UBE2E3-202ENST00000410062 NIPSNAP3BQ9BS92 247 aa17.08■□□□□ 0.32
UBE2E3-202ENST00000410062 TCRAP04437 139 aa17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 NMBP08949 121 aa17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 NKX2-5P52952 324 aaPredicted RBP17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 EIF5AL1Q6IS14 154 aaKnown RBP17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 PHLDA1Q8WV24 401 aaPredicted RBP17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 SGK494Q96LW2 274 aa17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 EPDR1Q9UM22 224 aa17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 KMT2CQ8NEZ4 4911 aaKnown RBP17.07■□□□□ 0.32
UBE2E3-202ENST00000410062 FAM74A7A6NL05 159 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 FAM222AQ5U5X8 452 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 Q6ZQT7 251 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 TRBV7-9A0A0J9YWB2 115 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 ZNF324O75467 553 aaPredicted RBP17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 SPART-AS1P0CW21 52 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 C12orf74Q32Q52 190 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 Q6ZTC4 211 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 DKK2Q9UBU2 259 aa17.06■□□□□ 0.32
UBE2E3-202ENST00000410062 H2AFB1P0C5Y9 115 aa17.05■□□□□ 0.32
UBE2E3-202ENST00000410062 CEMP1Q6PRD7 247 aaPredicted RBP17.05■□□□□ 0.32
UBE2E3-202ENST00000410062 SERTM2A0A1B0GWG4 89 aa17.04■□□□□ 0.32
UBE2E3-202ENST00000410062 PLAC8L1A1L4L8 177 aa17.04■□□□□ 0.32
UBE2E3-202ENST00000410062 NUPR2A6NF83 97 aa17.04■□□□□ 0.32
UBE2E3-202ENST00000410062 IFNA7P01567 189 aa17.04■□□□□ 0.32
UBE2E3-202ENST00000410062 LENEPQ9Y5L5 61 aa17.04■□□□□ 0.32
UBE2E3-202ENST00000410062 RNASE8Q8TDE3 154 aaKnown RBP17.03■□□□□ 0.32
UBE2E3-202ENST00000410062 TVP23CQ96ET8 276 aa17.03■□□□□ 0.32
UBE2E3-202ENST00000410062 C16orf74Q96GX8 76 aa17.03■□□□□ 0.32
UBE2E3-202ENST00000410062 PYGO2Q9BRQ0 406 aa17.03■□□□□ 0.32
UBE2E3-202ENST00000410062 K7EQM0 130 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms