RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 NUPR2A6NF83 97 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 DIRC3C9JPN6 131 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
GYPC-203ENST00000409836 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
GYPC-203ENST00000409836 HBE1P02100 147 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 FAM74A1Q5RGS3 127 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 DPPA3Q6W0C5 159 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 LINC00467Q9BRT7 94 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 ZNF471Q9BX82 626 aaPredicted RBP10.05□□□□□ -0.8
GYPC-203ENST00000409836 ARL2-SNX15V9GYD0 113 aa10.05□□□□□ -0.8
GYPC-203ENST00000409836 TRAV12-2A0A075B6T6 113 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 GGTLC3B5MD39 225 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 H7BYZ3 331 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 HMGB3O15347 200 aaKnown RBP10.04□□□□□ -0.8
GYPC-203ENST00000409836 CSN1S1P47710 185 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 TAS2R60P59551 318 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
GYPC-203ENST00000409836 C5orf17Q8NAS9 161 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 C11orf45Q8TAV5 145 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
GYPC-203ENST00000409836 LYSTQ99698 3801 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 TPT1P13693 172 aaKnown RBP10.03□□□□□ -0.8
GYPC-203ENST00000409836 ZNF138P52744 262 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 RNASE8Q8TDE3 154 aaKnown RBP10.03□□□□□ -0.8
GYPC-203ENST00000409836 VGLL1Q99990 258 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
GYPC-203ENST00000409836 LOC102723971A0A1B0GUV8 181 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 C7orf71A4D174 169 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 DEFB4AO15263 64 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 PFDN1O60925 122 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 PRB4P10163 310 aaPredicted RBP10.02□□□□□ -0.81
GYPC-203ENST00000409836 ERCC8Q13216 396 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 ZNF493Q6ZR52 646 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 C9orf62Q8N4C0 152 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.81
GYPC-203ENST00000409836 MBD3L1Q8WWY6 194 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 ALMS1Q8TCU4 4167 aa10.02□□□□□ -0.81
GYPC-203ENST00000409836 hCG_2014768A0A024R1R8 64 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 A0A1B0GVG6 124 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 PGPA6NDG6 321 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 C11orf94C9JXX5 98 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
GYPC-203ENST00000409836 ZFAND6Q6FIF0 208 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 CEMP1Q6PRD7 247 aaPredicted RBP10.01□□□□□ -0.81
GYPC-203ENST00000409836 CMTM2Q8TAZ6 248 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 C16orf74Q96GX8 76 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 PYGO2Q9BRQ0 406 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 TCEAL7Q9BRU2 100 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 TMEM208Q9BTX3 173 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 NKX6-2Q9C056 277 aaPredicted RBP10.01□□□□□ -0.81
GYPC-203ENST00000409836 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
GYPC-203ENST00000409836 IGHV3OR16-12A0A075B7B8 117 aa10□□□□□ -0.81
GYPC-203ENST00000409836 FBLL1A6NHQ2 334 aaKnown RBP10□□□□□ -0.81
GYPC-203ENST00000409836 TCRAP04437 139 aa10□□□□□ -0.81
GYPC-203ENST00000409836 FHITP49789 147 aa10□□□□□ -0.81
GYPC-203ENST00000409836 RAB5CP51148 216 aa10□□□□□ -0.81
GYPC-203ENST00000409836 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
GYPC-203ENST00000409836 CD300CQ08708 224 aa10□□□□□ -0.81
GYPC-203ENST00000409836 PRR9Q5T870 116 aa10□□□□□ -0.81
GYPC-203ENST00000409836 Q6AWC8 147 aa10□□□□□ -0.81
GYPC-203ENST00000409836 SLC51BQ86UW2 128 aa10□□□□□ -0.81
GYPC-203ENST00000409836 Q8TAT8 98 aa10□□□□□ -0.81
GYPC-203ENST00000409836 PHLDA1Q8WV24 401 aaPredicted RBP10□□□□□ -0.81
GYPC-203ENST00000409836 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 CXorf65A6NEN9 183 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 FAM74A7A6NL05 159 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 C12orf74Q32Q52 190 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
GYPC-203ENST00000409836 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
GYPC-203ENST00000409836 YTHDF2Q9Y5A9 579 aaKnown RBP9.99□□□□□ -0.81
GYPC-203ENST00000409836 ZNF705GA8MUZ8 300 aaPredicted RBP9.98□□□□□ -0.81
GYPC-203ENST00000409836 IGLV2-11P01706 119 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 TCTAP57738 103 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 BTN1A1Q13410 526 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 ZFP69Q49AA0 526 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 FAM222AQ5U5X8 452 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 Q6ZTC4 211 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 GOLT1AQ6ZVE7 132 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 CCDC28AQ8IWP9 274 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 LINC00612Q8N6U2 182 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 CYB561D1Q8N8Q1 229 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 LINC01587Q99440 93 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 EPDR1Q9UM22 224 aa9.98□□□□□ -0.81
GYPC-203ENST00000409836 SACSQ9NZJ4 4579 aa9.97□□□□□ -0.81
GYPC-203ENST00000409836 TRAV12-3A0A0B4J271 114 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms