RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
PAX3-208ENST00000409828 FAM19A4Q96LR4 140 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 C20orf144Q9BQM9 153 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 RETNQ9HD89 108 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 FBLL1A6NHQ2 334 aaKnown RBP13.19□□□□□ -0.3
PAX3-208ENST00000409828 GGTLC3B5MD39 225 aa13.19□□□□□ -0.3
PAX3-208ENST00000409828 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
PAX3-208ENST00000409828 CRISP2P16562 243 aa13.19□□□□□ -0.3
PAX3-208ENST00000409828 LEPP41159 167 aa13.19□□□□□ -0.3
PAX3-208ENST00000409828 NEU1Q99519 415 aa13.19□□□□□ -0.3
PAX3-208ENST00000409828 RARRES2Q99969 163 aa13.19□□□□□ -0.3
PAX3-208ENST00000409828 ZNF492Q9P255 531 aa13.19□□□□□ -0.3
PAX3-208ENST00000409828 IGKV2-40A0A087WW87 121 aaPredicted RBP13.18□□□□□ -0.3
PAX3-208ENST00000409828 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 INSP01308 110 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 IGKV2D-40P01614 121 aaPredicted RBP13.18□□□□□ -0.3
PAX3-208ENST00000409828 TCRAP04437 139 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 ZNF138P52744 262 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 OR11H2Q8NH07 326 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 VGLL1Q99990 258 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 EPDR1Q9UM22 224 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
PAX3-208ENST00000409828 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
PAX3-208ENST00000409828 K7EQM0 130 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 M0R2Z0 102 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 MIFP14174 115 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 FXYD7P58549 80 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 CCDC28AQ8IWP9 274 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
PAX3-208ENST00000409828 KLLNB2CW77 178 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 BLOC1S1P78537 153 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 ERCC8Q13216 396 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 C1orf158Q8N1D5 194 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 EDA2RQ9HAV5 297 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
PAX3-208ENST00000409828 UBE2G2P60604 165 aa13.15□□□□□ -0.3
PAX3-208ENST00000409828 GOLT1AQ6ZVE7 132 aa13.15□□□□□ -0.3
PAX3-208ENST00000409828 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
PAX3-208ENST00000409828 X6R8D5 127 aa13.15□□□□□ -0.3
PAX3-208ENST00000409828 F6UZH7 168 aa13.14□□□□□ -0.31
PAX3-208ENST00000409828 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
PAX3-208ENST00000409828 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
PAX3-208ENST00000409828 LYPD6BQ8NI32 183 aa13.14□□□□□ -0.31
PAX3-208ENST00000409828 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
PAX3-208ENST00000409828 PAGE4O60829 102 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 IFNA7P01567 189 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 TAGLN2P37802 199 aaKnown RBP13.13□□□□□ -0.31
PAX3-208ENST00000409828 GNG5P63218 68 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 ZFAND2AQ8N6M9 145 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 Q8NAQ8 132 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 WWC2-AS2Q96NR7 200 aa13.13□□□□□ -0.31
PAX3-208ENST00000409828 TRAV12-2A0A075B6T6 113 aa13.12□□□□□ -0.31
PAX3-208ENST00000409828 H7BYZ3 331 aa13.12□□□□□ -0.31
PAX3-208ENST00000409828 CCL20P78556 96 aa13.12□□□□□ -0.31
PAX3-208ENST00000409828 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
PAX3-208ENST00000409828 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
PAX3-208ENST00000409828 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
PAX3-208ENST00000409828 A0A1B0GV50 99 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 C7orf71A4D174 169 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 PEX7O00628 323 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 IFNA1P01562 189 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 IGLV2-11P01706 119 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 GPX1P07203 203 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 KLF12Q9Y4X4 402 aa13.11□□□□□ -0.31
PAX3-208ENST00000409828 TMEM189A5PLL7 270 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 RBMY1A1P0DJD3 496 aaKnown RBP13.1□□□□□ -0.31
PAX3-208ENST00000409828 RBMY1CP0DJD4 496 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 TAS2R60P59551 318 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 FLI1Q01543 452 aaPredicted RBP13.1□□□□□ -0.31
PAX3-208ENST00000409828 KIR3DS1Q14943 382 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 RBMY1FQ15415 496 aaKnown RBP13.1□□□□□ -0.31
PAX3-208ENST00000409828 Q8TAT8 98 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 NIPSNAP3BQ9BS92 247 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 NDFIP1Q9BT67 221 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 GNG13Q9P2W3 67 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
PAX3-208ENST00000409828 TRAV8-1A0A0A6YYK1 113 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 IGHV4-28A0A0C4DH34 117 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 ZNF324O75467 553 aaPredicted RBP13.09□□□□□ -0.31
PAX3-208ENST00000409828 S100A9P06702 114 aaKnown RBP13.09□□□□□ -0.31
PAX3-208ENST00000409828 ATP5G3P48201 142 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 ZNF680Q8NEM1 530 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 PYGO2Q9BRQ0 406 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 LINC00467Q9BRT7 94 aa13.09□□□□□ -0.31
PAX3-208ENST00000409828 IGHV3OR16-12A0A075B7B8 117 aa13.08□□□□□ -0.32
PAX3-208ENST00000409828 A0A0J9YWU9 116 aa13.08□□□□□ -0.32
PAX3-208ENST00000409828 Q6AWC8 147 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms