RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 LINC00310P59036 64 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 KRTAP10-9P60411 292 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 RIGQ13278 110 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 KLF5Q13887 457 aaPredicted RBP5.74□□□□□ -1.49
CXCR4-202ENST00000409817 TCF24Q7RTU0 167 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 OR4X2Q8NGF9 303 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 GLMPQ8WWB7 406 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 BORCS7Q96B45 105 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 FAM30AQ9NZY2 134 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 UBR5O95071 2799 aaPredicted RBP5.73□□□□□ -1.49
CXCR4-202ENST00000409817 IGHV3OR16-8A0A075B7F1 116 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 IGKV2-40A0A087WW87 121 aaPredicted RBP5.73□□□□□ -1.49
CXCR4-202ENST00000409817 A0A1B0GUT8 65 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 GRIFINA4D1Z8 144 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 K7EMT4 169 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 SERF1AO75920 110 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 IGKV2D-40P01614 121 aaPredicted RBP5.73□□□□□ -1.49
CXCR4-202ENST00000409817 PSMB8P28062 276 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 SRIP30626 198 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 PTTG1IPP53801 180 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 SLAQ13239 276 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 IQCJQ1A5X6 159 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 CFAP161Q6P656 301 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 TMEM256Q8N2U0 113 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 GATD1Q8NB37 220 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 NPFFR1Q9GZQ6 430 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 TP53TG3Q9ULZ0 132 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 LENEPQ9Y5L5 61 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 COL12A1Q99715 3063 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 LRRK2Q5S007 2527 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 TACC2O95359 2948 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 TMEM189A5PLL7 270 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 B5MCH6 92 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 APOHP02749 345 aaPredicted RBP5.73□□□□□ -1.49
CXCR4-202ENST00000409817 ELANEP08246 267 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 CAMPP49913 170 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 CRIP1P50238 77 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 FAM106AQ4KMX7 169 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 GPHB5Q86YW7 130 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 KCNS1Q96KK3 526 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 Q96MF0 132 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 ASCL2Q99929 193 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 KLK15Q9H2R5 256 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 DAZ1Q9NQZ3 744 aaKnown RBP5.73□□□□□ -1.49
CXCR4-202ENST00000409817 GSN-AS1Q9NRJ2 163 aa5.73□□□□□ -1.49
CXCR4-202ENST00000409817 PEF1Q9UBV8 284 aaKnown RBP5.73□□□□□ -1.49
CXCR4-202ENST00000409817 ANKRD17O75179 2603 aaKnown RBP5.72□□□□□ -1.49
CXCR4-202ENST00000409817 CR1P17927 2039 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 FABP5P3A8MUU1 101 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 J3QKU1 62 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 SH2D1AO60880 128 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 GZMBP10144 247 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 SLURP1P55000 103 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 FOXE3Q13461 319 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 TMEM78Q5T7P6 136 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 GDF5OSQ5U4N7 250 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 C9orf47Q6ZRZ4 202 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 TMEM86BQ8N661 226 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 C8orf49Q96NF6 230 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 VGLL1Q99990 258 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
CXCR4-202ENST00000409817 SAMD10Q9BYL1 202 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 EPG5Q9HCE0 2579 aa5.72□□□□□ -1.49
CXCR4-202ENST00000409817 CSPG4Q6UVK1 2322 aa5.71□□□□□ -1.49
CXCR4-202ENST00000409817 TRAV8-2A0A0B4J237 113 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV7-4-1A0A0J9YVY3 117 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF138P52744 262 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 HIST1H1AQ02539 215 aaPredicted RBP5.71□□□□□ -1.5
CXCR4-202ENST00000409817 KIAA1644Q3SXP7 199 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 UNQ9165/PRO28630Q6UXU0 137 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 KRTAP1-3Q8IUG1 177 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 SIGLECL1Q8N7X8 197 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 MAPK1IP1LQ8NDC0 245 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 C18orf32Q8TCD1 76 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 UFC1Q9Y3C8 167 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 PTPN13Q12923 2485 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV3-66A0A0C4DH42 116 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 TRBV7-9A0A0J9YWB2 115 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF705FA8MVS1 300 aaPredicted RBP5.71□□□□□ -1.5
CXCR4-202ENST00000409817 OVOL1O14753 267 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF207O43670 478 aaKnown RBP5.71□□□□□ -1.5
CXCR4-202ENST00000409817 NUPR1O60356 82 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 TRBV12-3P01733 135 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV3-11P01762 117 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 GPX1P07203 203 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 PLA2G2AP14555 144 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 HLA-DMBP28068 263 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF493Q6ZR52 646 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 Q8N2B8 174 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 MYOZ3Q8TDC0 251 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 LINC00477Q96M19 166 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 NRN1Q9NPD7 142 aa5.71□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV3OR16-13A0A075B7E8 117 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 LOC102724200A0A096LPH7 203 aaPredicted RBP5.7□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV3-74A0A0B4J1X5 117 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 A0A1B0GUS0 222 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 F2Z2F3 143 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms