RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TAS2R60P59551 318 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 NANOS2P60321 138 aaKnown RBP7.86□□□□□ -1.15
CHMP3-205ENST00000409810 ERCC8Q13216 396 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 TMUB2Q71RG4 321 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 IQCF2Q8IXL9 164 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 HYLS1Q96M11 299 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 LINC01587Q99440 93 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 NIPSNAP3BQ9BS92 247 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 KLK5Q9Y337 293 aaPredicted RBP7.86□□□□□ -1.15
CHMP3-205ENST00000409810 hCG_2014768A0A024R1R8 64 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 TRBV7-9A0A0J9YWB2 115 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 SERTM2A0A1B0GWG4 89 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 PGPA6NDG6 321 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 DIRC3C9JPN6 131 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 C11orf94C9JXX5 98 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 C1QBP02746 253 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 NMBP08949 121 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 SEC11BP0C7V7 166 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 SPART-AS1P0CW21 52 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 TPT1P13693 172 aaKnown RBP7.85□□□□□ -1.15
CHMP3-205ENST00000409810 EMP1P54849 157 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 GFI1BQ5VTD9 330 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 PHLDA1Q8WV24 401 aaPredicted RBP7.85□□□□□ -1.15
CHMP3-205ENST00000409810 ZNF492Q9P255 531 aa7.85□□□□□ -1.15
CHMP3-205ENST00000409810 C7orf71A4D174 169 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 J3KRW8 73 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 K7EQM0 130 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 CRISP2P16562 243 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 ZNF138P52744 262 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 EIF5AL1Q6IS14 154 aaKnown RBP7.84□□□□□ -1.15
CHMP3-205ENST00000409810 CEMP1Q6PRD7 247 aaPredicted RBP7.84□□□□□ -1.15
CHMP3-205ENST00000409810 CCDC28AQ8IWP9 274 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 C5orf17Q8NAS9 161 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 C16orf74Q96GX8 76 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 VGLL1Q99990 258 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 AGPAT4-IT1Q9H0P7 198 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 RPH3ALQ9UNE2 315 aa7.84□□□□□ -1.15
CHMP3-205ENST00000409810 YTHDF2Q9Y5A9 579 aaKnown RBP7.84□□□□□ -1.15
CHMP3-205ENST00000409810 TRAV12-3A0A0B4J271 114 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 MAP1LC3B2A6NCE7 125 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 ZNF705GA8MUZ8 300 aaPredicted RBP7.83□□□□□ -1.16
CHMP3-205ENST00000409810 KLLNB2CW77 178 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 GPX1P07203 203 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 HTN1P15515 57 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 ZNF726P1Q15940 193 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 DPPA3Q6W0C5 159 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 ZNF493Q6ZR52 646 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 TMEM263Q8WUH6 116 aaKnown RBP7.83□□□□□ -1.16
CHMP3-205ENST00000409810 TMED6Q8WW62 240 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 FAM19A4Q96LR4 140 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 PYGO2Q9BRQ0 406 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 MAP1LC3BQ9GZQ8 125 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 DKK2Q9UBU2 259 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 CELA1Q9UNI1 258 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
CHMP3-205ENST00000409810 TRAV10A0A0B4J240 114 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 A0A1W2PRE2 83 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 LYRM9A8MSI8 78 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 KIR3DS1Q14943 382 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 FAM222AQ5U5X8 452 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 Q6ZTC4 211 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 GOLT1AQ6ZVE7 132 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 SSX7Q7RTT5 188 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 Q8TAT8 98 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 C2CD4CQ8TF44 421 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 NDFIP1Q9BT67 221 aa7.82□□□□□ -1.16
CHMP3-205ENST00000409810 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
CHMP3-205ENST00000409810 FBLL1A6NHQ2 334 aaKnown RBP7.81□□□□□ -1.16
CHMP3-205ENST00000409810 RNASE4P34096 147 aaKnown RBP7.81□□□□□ -1.16
CHMP3-205ENST00000409810 FGF8P55075 233 aaPredicted RBP7.81□□□□□ -1.16
CHMP3-205ENST00000409810 TCTAP57738 103 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 GNG5P63218 68 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 BTN1A1Q13410 526 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 C12orf74Q32Q52 190 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 LGALSLQ3ZCW2 172 aaPredicted RBP7.81□□□□□ -1.16
CHMP3-205ENST00000409810 ZFP69Q49AA0 526 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 ZFAND2AQ8N6M9 145 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 FAM213BQ8TBF2 198 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 LYSTQ99698 3801 aa7.81□□□□□ -1.16
CHMP3-205ENST00000409810 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
CHMP3-205ENST00000409810 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 SNURFLB1AK76 121 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 GGTLC3B5MD39 225 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 RGS13O14921 159 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 TCRAP04437 139 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 RAB5CP51148 216 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 UBE2G2P60604 165 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 DAD1P61803 113 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 SUMO1P63165 101 aaKnown RBP7.8□□□□□ -1.16
CHMP3-205ENST00000409810 CD300CQ08708 224 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 SLC51BQ86UW2 128 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 CYB561D1Q8N8Q1 229 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 ZNF680Q8NEM1 530 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 RNASE8Q8TDE3 154 aaKnown RBP7.8□□□□□ -1.16
CHMP3-205ENST00000409810 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 TIMM8BQ9Y5J9 83 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms