RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 NBEAP1P0C6P0 100 aa9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 MGST1P10620 155 aaKnown RBP9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 ESDP10768 282 aa9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 BAGE2Q86Y30 109 aa9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 OR9G4Q8NGQ1 327 aa9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 PCLOQ9Y6V0 5065 aa9.54□□□□□ -0.88
CHRNA1-205ENST00000409542 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 NPIPB5A8MRT5 1133 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 SLC25A5P05141 298 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 APELAP0DMC3 54 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 GZMBP10144 247 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 PSG1P11464 419 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 PKIAP61925 76 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 Q0VG73 95 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 FXYD3Q14802 87 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 ZNF562Q6V9R5 426 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 C5orf17Q8NAS9 161 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 GRAMD2BQ96HH9 432 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 ATG101Q9BSB4 218 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 WFDC10AQ9H1F0 79 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 MRPL27Q9P0M9 148 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 PGPA6NDG6 321 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 ZNF705GA8MUZ8 300 aaPredicted RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 SNURFLB1AK76 121 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 CRISP2P16562 243 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 LYZP61626 148 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 UBE2G1P62253 170 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 RANP62826 216 aaKnown RBP9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 TMEM136Q6ZRR5 245 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 IL17DQ8TAD2 202 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 OTORQ9NRC9 128 aa9.53□□□□□ -0.88
CHRNA1-205ENST00000409542 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 TOMM40O96008 361 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 HLA-DQA1P01909 254 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 RD3LP0DJH9 198 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 PAFAH1B2P68402 229 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 ZNF600Q6ZNG1 722 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 TMEM256Q8N2U0 113 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 DEFB125Q8N687 156 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 BLNKQ8WV28 456 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 TMEM68Q96MH6 324 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 SHANK2-AS3Q9BTD1 123 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 Q9H3A6 140 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 RNF24Q9Y225 148 aa9.52□□□□□ -0.89
CHRNA1-205ENST00000409542 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 H3BRN7 92 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 CD7P09564 240 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 GNG5P63218 68 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 LCN12Q6JVE5 192 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 S100A7AQ86SG5 101 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 GPR82Q96P67 336 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 TP53TG3Q9ULZ0 132 aa9.51□□□□□ -0.89
CHRNA1-205ENST00000409542 IGLV11-55A0A075B6I3 123 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 ZNF785A8K8V0 405 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 TSTD3H0UI37 97 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 LY6G6CO95867 125 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 LTAP01374 205 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 TCRAP04437 139 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 EDN2P20800 178 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 TCL1AP56279 114 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 CT83Q5H943 113 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 TTC9CQ8N5M4 171 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 NUDT10Q8NFP7 164 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 NUDT11Q96G61 164 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 PEF1Q9UBV8 284 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 NAT8BQ9UHF3 227 aa9.5□□□□□ -0.89
CHRNA1-205ENST00000409542 GRIFINA4D1Z8 144 aa9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 LINC00310P59036 64 aa9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 RAB4BP61018 213 aa9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 IQCJQ1A5X6 159 aa9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 TSKUQ8WUA8 353 aa9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 ZNF331Q9NQX6 463 aaPredicted RBP9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 ZNF586Q9NXT0 402 aa9.49□□□□□ -0.89
CHRNA1-205ENST00000409542 A0A0G2JLM5 398 aa9.48□□□□□ -0.89
CHRNA1-205ENST00000409542 H3BUA1 57 aa9.48□□□□□ -0.89
CHRNA1-205ENST00000409542 NUPR1O60356 82 aa9.48□□□□□ -0.89
CHRNA1-205ENST00000409542 MFAP4P55083 255 aa9.48□□□□□ -0.89
CHRNA1-205ENST00000409542 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
CHRNA1-205ENST00000409542 LEMD1Q68G75 181 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms