RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 MRAPQ8TCY5 172 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 RXFP4Q8TDU9 374 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 TMEM250H0YL14 139 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 CMC4P56277 68 aaPredicted RBP10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 MEF2BQ02080 365 aaPredicted RBP10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 CCDC28AQ8IWP9 274 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 SVBPQ8N300 66 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 C5orf17Q8NAS9 161 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 OR10J6PQ8NGY7 276 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 EPDR1Q9UM22 224 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 PRELID1Q9Y255 219 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 TCRAP04437 139 aa10.38□□□□□ -0.75
CHRNA1-204ENST00000409323 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
CHRNA1-204ENST00000409323 TRPT1Q86TN4 253 aaKnown RBP10.38□□□□□ -0.75
CHRNA1-204ENST00000409323 MRPL53Q96EL3 112 aaKnown RBP10.38□□□□□ -0.75
CHRNA1-204ENST00000409323 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
CHRNA1-204ENST00000409323 M0R2Z0 102 aa10.37□□□□□ -0.75
CHRNA1-204ENST00000409323 PEX7O00628 323 aa10.37□□□□□ -0.75
CHRNA1-204ENST00000409323 APOC3P02656 99 aa10.37□□□□□ -0.75
CHRNA1-204ENST00000409323 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
CHRNA1-204ENST00000409323 SOHLH1Q5JUK2 328 aa10.37□□□□□ -0.75
CHRNA1-204ENST00000409323 CLEC5AQ9NY25 188 aa10.37□□□□□ -0.75
CHRNA1-204ENST00000409323 DNAH3Q8TD57 4116 aa10.36□□□□□ -0.75
CHRNA1-204ENST00000409323 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
CHRNA1-204ENST00000409323 SPINK13Q1W4C9 94 aa10.36□□□□□ -0.75
CHRNA1-204ENST00000409323 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 NPIPB6E9PJ23 425 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 CEBPGP53567 150 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 ATG101Q9BSB4 218 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 DERL1Q9BUN8 251 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 PPP1R14DQ9NXH3 145 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 PDE6DO43924 150 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 DUSP14O95147 198 aaKnown RBP10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 SNAPINO95295 136 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 TMEM78Q5T7P6 136 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 NKX6-2Q9C056 277 aaPredicted RBP10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
CHRNA1-204ENST00000409323 CA1P00915 261 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-204ENST00000409323 IGLV2-11P01706 119 aa10.34□□□□□ -0.75
CHRNA1-204ENST00000409323 AKR1C3P42330 323 aa10.34□□□□□ -0.75
CHRNA1-204ENST00000409323 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
CHRNA1-204ENST00000409323 ATRAIDQ6UW56 229 aa10.34□□□□□ -0.75
CHRNA1-204ENST00000409323 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
CHRNA1-204ENST00000409323 F6UZH7 168 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 Q6ZQT7 251 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 CLRN3Q8NCR9 226 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 C11orf52Q96A22 123 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 RETNQ9HD89 108 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
CHRNA1-204ENST00000409323 ZNF138P52744 262 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 DEFB135Q30KP9 77 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 PRR9Q5T870 116 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 LINC00322Q6ZN03 302 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 C2CD4CQ8TF44 421 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 HIST1H2BAQ96A08 127 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
CHRNA1-204ENST00000409323 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 K7EQM0 130 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 UBE2G1P62253 170 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 FLI1Q01543 452 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 ZNF674Q2M3X9 581 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 IGHV3OR16-12A0A075B7B8 117 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 A8MTW9 85 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 A8MZ25 164 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 PNRC1Q12796 327 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 BTN1A1Q13410 526 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 Q86TA4 180 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 TMEM75Q8N9X5 138 aa10.31□□□□□ -0.76
CHRNA1-204ENST00000409323 PGPEP1LA6NFU8 196 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 PRM2P04554 102 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 APOC4P55056 127 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 NUTF2P61970 127 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 NIPSNAP3BQ9BS92 247 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 SDF2L1Q9HCN8 221 aa10.3□□□□□ -0.76
CHRNA1-204ENST00000409323 MEGF8Q7Z7M0 2845 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 TRAV12-3A0A0B4J271 114 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 SCO1O75880 301 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 CDKN1BP46527 198 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms