RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
SHANK2-203ENST00000409161 ATOX1O00244 68 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 CFHR1Q03591 330 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 KLRD1Q13241 179 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 ZNF837Q96EG3 531 aaPredicted RBP9.87□□□□□ -0.83
SHANK2-203ENST00000409161 A0A1W2PR77 199 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 EREGO14944 169 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 NTF4P34130 210 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 ETDBQ3ZM63 59 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 Q8TAT8 98 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 J3KT08 172 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 FOXF2Q12947 444 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 GATA3P23771 443 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 CSRP2Q16527 193 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 ATG2AQ2TAZ0 1938 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 IGKV1D-8A0A087WSZ0 117 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 C20orf78Q9BR46 151 aa9.87□□□□□ -0.83
SHANK2-203ENST00000409161 CTSBP07858 339 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 C10orf91Q5T1B1 145 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 PYGO2Q9BRQ0 406 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 TMEM14CQ9P0S9 112 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 NUP210LQ5VU65 1888 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 YPEL3P61236 119 aaPredicted RBP9.86□□□□□ -0.83
SHANK2-203ENST00000409161 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 MYO18BQ8IUG5 2567 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 PRSS47A8MTI9 375 aa9.86□□□□□ -0.83
SHANK2-203ENST00000409161 A0A087WWL8 130 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 NTN3O00634 580 aaPredicted RBP9.85□□□□□ -0.83
SHANK2-203ENST00000409161 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■■■□□ 17.1
SHANK2-203ENST00000409161 NOTCH4Q99466 2003 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 B4DSR2 109 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 EFNA4P52798 201 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 MORN5Q5VZ52 161 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 ORMDL1Q9P0S3 153 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 EXPH5Q8NEV8 1989 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
SHANK2-203ENST00000409161 RNASE2P10153 161 aaKnown RBP9.85□□□□□ -0.83
SHANK2-203ENST00000409161 NBL1P41271 181 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 RHOHQ15669 191 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 Q6ZVH6 145 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 C1orf43Q9BWL3 253 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 SCRT2Q9NQ03 307 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.84□□□□□ -0.83
SHANK2-203ENST00000409161 IGHG2P01859 326 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 CFHR2P36980 270 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 GAS1P54826 345 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 F6UB75 175 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 QRFPP83859 136 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 ATP1A1-AS1Q5TC04 95 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 SYNJ2BPP57105 145 aa9.84□□□□□ -0.83
SHANK2-203ENST00000409161 TGFBR3LH3BV60 316 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 IGKV1-27A0A075B6S5 117 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 LYPD3O95274 346 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 CD24P25063 80 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 FXYD7P58549 80 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 TRAV25A0A0B4J276 109 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 NSUN5P1Q3KNT7 163 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 C3orf36Q3SXR2 165 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 RHPN1-AS1Q9BWJ2 59 aa9.83□□□□□ -0.84
SHANK2-203ENST00000409161 ATP5G1P05496 136 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 HERV-K104P63124 156 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 Q6P435 159 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 KLHL30-AS1Q8NEE0 82 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 IGKV1-12A0A0C4DH73 117 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 NPYP01303 97 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 IGKV1D-12P01611 117 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 HS3ST6Q96QI5 342 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 SDHAF1A6NFY7 115 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 J3QQQ9 107 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 MRPL51Q4U2R6 128 aaKnown RBP9.82□□□□□ -0.84
SHANK2-203ENST00000409161 CFHR4Q92496 578 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 SPRR3Q9UBC9 169 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 MP68P56378 58 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 ZNF672Q499Z4 452 aaPredicted RBP9.82□□□□□ -0.84
SHANK2-203ENST00000409161 GGNQ86UU5 652 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 LCNL1Q6ZST4 164 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 MESP1Q9BRJ9 268 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 LINC00473A8K010 186 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 H3BMG7 143 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 APOC4P55056 127 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 KLF5Q13887 457 aaPredicted RBP9.82□□□□□ -0.84
SHANK2-203ENST00000409161 IGFBPL1Q8WX77 278 aa9.82□□□□□ -0.84
SHANK2-203ENST00000409161 NDPQ00604 133 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 ZNF493Q6ZR52 646 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 Q6ZWC4 215 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 SMIM2Q9BVW6 85 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 NPSP0C0P6 89 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 IGHV2-5P01817 119 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
SHANK2-203ENST00000409161 PNRC2Q9NPJ4 139 aaKnown RBP9.81□□□□□ -0.84
SHANK2-203ENST00000409161 RPL35AP18077 110 aaKnown RBP9.81□□□□□ -0.84
SHANK2-203ENST00000409161 C15orf53Q8NAA6 179 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 ZNF134P52741 427 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 CRYBA4P53673 196 aa9.81□□□□□ -0.84
SHANK2-203ENST00000409161 ANKHD1Q8IWZ3 2542 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms