RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
APOBEC3B-204ENST00000407298 TRAV5A0A0B4J249 113 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 A0A0J9YY99 117 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 E5RGE8 158 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 H3BQ15 152 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 H3BTX0 84 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 RLN2P04090 185 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 FGF7P21781 194 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 RPL29P47914 159 aaKnown RBP8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 ERVFC1-1P60608 527 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 HBG1P69891 147 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 HBG2P69892 147 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 PSG3Q16557 428 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 GCSAMLQ5JQS6 135 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 C10orf113Q5VZT2 155 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 OR5C1Q8NGR4 320 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 NPCDR1Q9BY65 106 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 PXMP4Q9Y6I8 212 aa8.48□□□□□ -1.05
APOBEC3B-204ENST00000407298 SNURFLB1AK76 121 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 CXCL2P19875 107 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 LINC00315P59091 139 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 ATP6V1FQ16864 119 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 Q5VSD8 79 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 LCN15Q6UWW0 184 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 THAP6Q8TBB0 222 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 DNAJC4Q9NNZ3 241 aa8.47□□□□□ -1.05
APOBEC3B-204ENST00000407298 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
APOBEC3B-204ENST00000407298 GAGE12BA1L429 117 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 SSNA1O43805 119 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 GAGE7O76087 117 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 MPC2O95563 127 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 GAGE12FP0CL80 117 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 GAGE12GP0CL81 117 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 GAGE12IP0CL82 117 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 CYCSP99999 105 aaKnown RBP8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 RAB31Q13636 194 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 Q6ZRG5 221 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 NFE4Q86UQ8 179 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 BPIFA4PQ86YQ2 179 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 RPUSD4Q96CM3 377 aaKnown RBP8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 SAT2Q96F10 170 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 SLC50A1Q9BRV3 221 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 ALG5Q9Y673 324 aa8.46□□□□□ -1.06
APOBEC3B-204ENST00000407298 SIVA1O15304 175 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 MPDU1O75352 247 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 PTTG1O95997 202 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 XGP55808 180 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 OR1L4Q8NGR5 311 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 PFDN5Q99471 154 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 SLC25A31Q9H0C2 315 aa8.45□□□□□ -1.06
APOBEC3B-204ENST00000407298 TRAV9-2A0A087WT02 112 aa8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 HOXA5P20719 270 aa8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 FAM167A-AS1Q96KT0 104 aa8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 WDR61Q9GZS3 305 aaKnown RBP8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 MBD2Q9UBB5 411 aa8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 HSPB11Q9Y547 144 aa8.44□□□□□ -1.06
APOBEC3B-204ENST00000407298 A0A096LPF7 62 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 NDUFB4O95168 129 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 PYYP10082 97 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 DAZ2Q13117 558 aaKnown RBP8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 KIR3DS1Q14943 382 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 ATP5SQ99766 215 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 SLC25A2Q9BXI2 301 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
APOBEC3B-204ENST00000407298 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 TRBV19A0A075B6N1 114 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 ICAM4Q14773 271 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 MIR17HGQ75NE6 70 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 PARD6GQ9BYG4 376 aaPredicted RBP8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 WFDC1Q9HC57 220 aa8.42□□□□□ -1.06
APOBEC3B-204ENST00000407298 K7EP13 123 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 M0R3E3 92 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 ZNF253O75346 499 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 NXPH4O95158 308 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 PET100P0DJ07 73 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 RPL12P30050 165 aaKnown RBP8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 LEPP41159 167 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 GUK1Q16774 197 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 GFI1BQ5VTD9 330 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 SMIM3Q9BZL3 60 aa8.41□□□□□ -1.06
APOBEC3B-204ENST00000407298 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 HIST1H1EP10412 219 aaKnown RBP8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 SLAQ13239 276 aa8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 ZNF680Q8NEM1 530 aa8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 ODF3Q96PU9 254 aa8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
APOBEC3B-204ENST00000407298 A0A087WTM6 91 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 PAX4O43316 350 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms