RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PRB2P02812 416 aaPredicted RBP9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 GPX1P07203 203 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 CTSGP08311 255 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 BMI1P35226 326 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 SLC35B1P78383 322 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 NDPQ00604 133 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 REC114Q7Z4M0 266 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 OR2D3Q8NGH3 330 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 ZNF502Q8TBZ5 544 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 SLC50A1Q9BRV3 221 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 NDFIP1Q9BT67 221 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 A0A087X0K7 114 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 A0A1B0GUS0 222 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 FAM181BA6NEQ2 426 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 H3BTX0 84 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 H3BUX3 64 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 BRI3O95415 125 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 CA1P00915 261 aaPredicted RBP9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 PMCHP20382 165 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 RHOGP84095 191 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 ATP5G2Q06055 141 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 ECSCRQ19T08 205 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 C16orf54Q6UWD8 224 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 COX8CQ7Z4L0 72 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 PIFOQ8TCI5 191 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 HSPB9Q9BQS6 159 aa9.97□□□□□ -0.81
SMARCB1-203ENST00000407082 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 ZNF785A8K8V0 405 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 F8W735 103 aaPredicted RBP9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 ATP6V0E1O15342 81 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 ZNF324O75467 553 aaPredicted RBP9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 IGLV2-11P01706 119 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 AMTP48728 403 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 LY6EQ16553 131 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 TOMM20LQ6UXN7 152 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 TMEM86BQ8N661 226 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 C5orf56Q8N8D9 126 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 CITED1Q99966 193 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 TP53TG3Q9ULZ0 132 aa9.96□□□□□ -0.82
SMARCB1-203ENST00000407082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 RBAKDNA6NC62 111 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 HSBP1O75506 76 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 CAMPP49913 170 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 KIAA1644Q3SXP7 199 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 FAM209BQ5JX69 171 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 TCF24Q7RTU0 167 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 ZNF664Q8N3J9 261 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 CHCHD1Q96BP2 118 aaKnown RBP9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 MRPL53Q96EL3 112 aaKnown RBP9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 METTL26Q96S19 204 aa9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 ALKBH7Q9BT30 221 aaPredicted RBP9.95□□□□□ -0.82
SMARCB1-203ENST00000407082 TRAV41A0A0B4J266 112 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 A0A1W2PS18 150 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 TMEM189A5PLL7 270 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 NUPR1O60356 82 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 CLEC3BP05452 202 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 GPR183P32249 361 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 SLAQ13239 276 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 C9orf152Q5JTZ5 239 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 CDPF1Q6NVV7 123 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 NDUFAF3Q9BU61 184 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 NRN1Q9NPD7 142 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 VPREB3Q9UKI3 123 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 S4R3C0 116 aa9.94□□□□□ -0.82
SMARCB1-203ENST00000407082 CLPSL1A2RUU4 121 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 A6NDX4 124 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 OR5AL1P0C617 328 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 KRTAP10-3P60369 221 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 PMCHL1Q16048 86 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 TEX43Q6ZNM6 134 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 ZC2HC1AQ96GY0 325 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 C17orf77Q96MU5 243 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 CMYA5Q8N3K9 4069 aa9.93□□□□□ -0.82
SMARCB1-203ENST00000407082 TRAV8-1A0A0A6YYK1 113 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 G3V4G9 280 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 FRMD6-AS1P0C7T7 363 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 LINC00310P59036 64 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 LINC00322Q6ZN03 302 aaPredicted RBP9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 Q6ZWC4 215 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 VAMP8Q9BV40 100 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
SMARCB1-203ENST00000407082 KIR2DL5BA0A0G2JN68 375 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 KIR2DL5BA0A0G2JPC4 375 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 BUB3O43684 328 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 IGHV3-23P01764 117 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms