RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TRAV8-1A0A0A6YYK1 113 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 TRAV2A0A0B4J234 112 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 LINC00862A6NCI5 91 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 OR11H12B2RN74 326 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 DIRC3C9JPN6 131 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 TCRAP04437 139 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 CSN1S1P47710 185 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 FXYD7P58549 80 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
GPC3-203ENST00000406757 MEF2BQ02080 365 aaPredicted RBP6.18□□□□□ -1.42
GPC3-203ENST00000406757 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
GPC3-203ENST00000406757 ACTL10Q5JWF8 245 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 LYPD1Q8N2G4 141 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 MED9Q9NWA0 146 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 U3KQK5 164 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 SORL1Q92673 2214 aa6.18□□□□□ -1.42
GPC3-203ENST00000406757 RAB19A4D1S5 217 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 J3KRW8 73 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 PEX7O00628 323 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 SRP19P09132 144 aaKnown RBP6.17□□□□□ -1.42
GPC3-203ENST00000406757 NHLRC4P0CG21 123 aaPredicted RBP6.17□□□□□ -1.42
GPC3-203ENST00000406757 RPL35AP18077 110 aaKnown RBP6.17□□□□□ -1.42
GPC3-203ENST00000406757 PMS2P11Q13670 270 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 PEA15Q15121 130 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 ZNF674Q2M3X9 581 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 Q8N1Y9 231 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 C5orf17Q8NAS9 161 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 OR4B1Q8NGF8 309 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 Q8TAT8 98 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 DERL1Q9BUN8 251 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 AGPAT4-IT1Q9H0P7 198 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 PRELID1Q9Y255 219 aa6.17□□□□□ -1.42
GPC3-203ENST00000406757 DNAH7Q8WXX0 4024 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 A0A0J9YX75 114 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 RBMY1BA6NDE4 496 aaKnown RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 RBMY1EA6NEQ0 496 aaKnown RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 RBMY1DP0C7P1 496 aaKnown RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 AKR1C3P42330 323 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 CNN1P51911 297 aaKnown RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 EBLN2Q6P2I7 272 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 PRNTQ86SH4 94 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 GTSCR1Q86UQ5 136 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 CYB561D1Q8N8Q1 229 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 OR8A1Q8NGG7 326 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 SAV1Q9H4B6 383 aaPredicted RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 ZMAT5Q9UDW3 170 aaKnown RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 AGRNO00468 2067 aa6.16□□□□□ -1.42
GPC3-203ENST00000406757 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
GPC3-203ENST00000406757 PGPEP1LA6NFU8 196 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 F6UZH7 168 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 H3BMM0 161 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 IGLV2-11P01706 119 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 KIR3DS1Q14943 382 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 SAMD13Q5VXD3 122 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 FOXI2Q6ZQN5 318 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 NHLRC2Q8NBF2 726 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 OR10J6PQ8NGY7 276 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 C2CD4CQ8TF44 421 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
GPC3-203ENST00000406757 TVP23CQ96ET8 276 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 C8orf49Q96NF6 230 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 ATG101Q9BSB4 218 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.42
GPC3-203ENST00000406757 SLC35B3Q9H1N7 401 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 SRD5A3Q9H8P0 318 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 PSG8Q9UQ74 426 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 ARL2-SNX15V9GYD0 113 aa6.15□□□□□ -1.42
GPC3-203ENST00000406757 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 C3orf84H3BNL1 204 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 PDE6DO43924 150 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 TAGLN2P37802 199 aaKnown RBP6.14□□□□□ -1.43
GPC3-203ENST00000406757 RPL35P42766 123 aaKnown RBP6.14□□□□□ -1.43
GPC3-203ENST00000406757 CMC4P56277 68 aaPredicted RBP6.14□□□□□ -1.43
GPC3-203ENST00000406757 FLI1Q01543 452 aaPredicted RBP6.14□□□□□ -1.43
GPC3-203ENST00000406757 Q6ZQT7 251 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 STHQ8IWL8 128 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 HIST1H2BAQ96A08 127 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 C11orf52Q96A22 123 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 PARLQ9H300 379 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 PPP1R14DQ9NXH3 145 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 CLEC5AQ9NY25 188 aa6.14□□□□□ -1.43
GPC3-203ENST00000406757 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 TRAV12-2A0A075B6T6 113 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 K7EQM0 130 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 M0R2Z0 102 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 DUSP14O95147 198 aaKnown RBP6.13□□□□□ -1.43
GPC3-203ENST00000406757 SFTA3P0C7M3 94 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 HLA-DRB4P13762 266 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 ZNF138P52744 262 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 UBE2G1P62253 170 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 TMEM183BQ1AE95 376 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 SPINK13Q1W4C9 94 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 TMEM78Q5T7P6 136 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 PRR9Q5T870 116 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 TXNDC17Q9BRA2 123 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 TUBA4BQ9H853 241 aa6.13□□□□□ -1.43
GPC3-203ENST00000406757 ZNF492Q9P255 531 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms