RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 C10orf142B7Z368 130 aa11.15□□□□□ -0.63
DUSP28-202ENST00000405954 SPRY3O43610 288 aa11.15□□□□□ -0.63
DUSP28-202ENST00000405954 TNFRSF6BO95407 300 aa11.15□□□□□ -0.63
DUSP28-202ENST00000405954 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.63
DUSP28-202ENST00000405954 PRO0461Q9UI25 63 aa11.15□□□□□ -0.63
DUSP28-202ENST00000405954 COL5A1P20908 1838 aaPredicted RBP11.15□□□□□ -0.63
DUSP28-202ENST00000405954 PINLYPA6NC86 204 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 TCL1BO95988 128 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 SPXQ9BT56 116 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 SCNM1Q9BWG6 230 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 FOXC1Q12948 553 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
DUSP28-202ENST00000405954 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
DUSP28-202ENST00000405954 K7ESF4 209 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 CRLF1O75462 422 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 SLC25A16P16260 332 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 PLNP26678 52 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 EIF4EBP1Q13541 118 aaPredicted RBP11.13□□□□□ -0.63
DUSP28-202ENST00000405954 KRTAP27-1Q3LI81 207 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 PRSS2P07478 247 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 ASIPP42127 132 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 DLX1P56177 255 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 VMA21Q3ZAQ7 101 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 PRO3102Q9H379 93 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 ADAMTS20P59510 1910 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 SVEP1Q4LDE5 3571 aa11.13□□□□□ -0.63
DUSP28-202ENST00000405954 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
DUSP28-202ENST00000405954 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
DUSP28-202ENST00000405954 CD177Q8N6Q3 437 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 OR13C6PQ8NH95 151 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 SIT1Q9Y3P8 196 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 U3KQA8 63 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
DUSP28-202ENST00000405954 MEOX1P50221 254 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 TMEM170BQ5T4T1 132 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 PRADC1Q9BSG0 188 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 Q8TAT8 98 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
DUSP28-202ENST00000405954 SH2D1AO60880 128 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 TMEM126AQ9H061 195 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 DEFB127Q9H1M4 99 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
DUSP28-202ENST00000405954 COX6A1P12074 109 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 PMVKQ15126 192 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
DUSP28-202ENST00000405954 FAM57AQ8TBR7 257 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 EDA2RQ9HAV5 297 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 S4R3C0 116 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
DUSP28-202ENST00000405954 PIEZO2Q9H5I5 2752 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 IGLV3-12A0A075B6K2 115 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 LOC107984640A0A0U1RRK4 108 aa11.11□□□□□ -0.63
DUSP28-202ENST00000405954 IGHV1-45A0A0A0MS14 117 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 C15orf65H3BRN8 121 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 H7C1H1 209 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 CEACAM4O75871 244 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
DUSP28-202ENST00000405954 LAGE3Q14657 143 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 KLHL30-AS1Q8NEE0 82 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 PCNX1Q96RV3 2341 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 NGBQ9NPG2 151 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 TECTAO75443 2155 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 MUC6Q6W4X9 2439 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 RELNP78509 3460 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
DUSP28-202ENST00000405954 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 LINC00694P0DN24 101 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
DUSP28-202ENST00000405954 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 TRGV9Q99603 122 aa11.1□□□□□ -0.63
DUSP28-202ENST00000405954 MRPL36Q9P0J6 103 aaKnown RBP11.1□□□□□ -0.63
DUSP28-202ENST00000405954 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
DUSP28-202ENST00000405954 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
DUSP28-202ENST00000405954 TCF15Q12870 199 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 TMEM133Q9H2Q1 129 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 FAM236AA0A1B0GUQ0 79 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 FAM236BA0A1B0GV22 79 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 CGB1A6NKQ9 187 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 Q0VFX4 171 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 UTF1Q5T230 341 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 TMEM105Q8N8V8 129 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
DUSP28-202ENST00000405954 WI2-2373I1.2A0A1W2PRP0 233 aa11.08□□□□□ -0.64
DUSP28-202ENST00000405954 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
DUSP28-202ENST00000405954 KLRB1Q12918 225 aa11.08□□□□□ -0.64
DUSP28-202ENST00000405954 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
DUSP28-202ENST00000405954 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
DUSP28-202ENST00000405954 CENPVL3A0A0U1RRI6 287 aa11.08□□□□□ -0.64
DUSP28-202ENST00000405954 DKK1O94907 266 aa11.08□□□□□ -0.64
DUSP28-202ENST00000405954 CXCL12P48061 93 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms