RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PRADC1Q9BSG0 188 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 H3BTX0 84 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 INTS1Q8N201 2190 aaKnown RBP12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 A0A1B0GUT8 65 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 CCL3L1P16619 93 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 HCP5Q6MZN7 132 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 CEND1Q8N111 149 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
COL4A3BP-204ENST00000405807 CADP27708 2225 aa12.77□□□□□ -0.36
COL4A3BP-204ENST00000405807 SEC61GP60059 68 aa12.77□□□□□ -0.36
COL4A3BP-204ENST00000405807 RIGQ13278 110 aa12.77□□□□□ -0.36
COL4A3BP-204ENST00000405807 C12orf74Q32Q52 190 aa12.77□□□□□ -0.36
COL4A3BP-204ENST00000405807 RUSC1-AS1Q66K80 236 aa12.77□□□□□ -0.37
COL4A3BP-204ENST00000405807 PVRIGQ6DKI7 326 aa12.77□□□□□ -0.37
COL4A3BP-204ENST00000405807 MBD3L4A6NDZ8 208 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 MBD3L3A6NE82 208 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 MBD3L5A6NJ08 208 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 PRNTQ86SH4 94 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 MBD3L2Q8NHZ7 208 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 EDN2P20800 178 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 LY6DQ14210 128 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 SEM1Q6ZVN7 128 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 PRSS3P2Q8NHM4 247 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 HIGD1BQ9P298 99 aa12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 RAI1Q7Z5J4 1906 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-204ENST00000405807 TRAV8-1A0A0A6YYK1 113 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 IGLC6P0CF74 106 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 LINC00311Q8N616 119 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 IGFL2Q6UWQ7 119 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 GOLT1AQ6ZVE7 132 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 OOSP1A8MZH6 123 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 SIGLEC15Q6ZMC9 328 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 TPSG1Q9NRR2 321 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 TMEM14CQ9P0S9 112 aa12.75□□□□□ -0.37
COL4A3BP-204ENST00000405807 IGLV2-11P01706 119 aa12.74□□□□□ -0.37
COL4A3BP-204ENST00000405807 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
COL4A3BP-204ENST00000405807 CHCHD5Q9BSY4 110 aa12.74□□□□□ -0.37
COL4A3BP-204ENST00000405807 TRIOBPQ9H2D6 2365 aa12.74□□□□□ -0.37
COL4A3BP-204ENST00000405807 J3QLI3 93 aa12.74□□□□□ -0.37
COL4A3BP-204ENST00000405807 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
COL4A3BP-204ENST00000405807 TMSB15BA0A087X1C1 80 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 A0A1B0GX51 115 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 OVOL3O00110 214 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 ARMS2P0C7Q2 107 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 CCL8P80075 99 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 TMEM190Q8WZ59 177 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 NAV3Q8IVL0 2385 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 IGHV3-21A0A0B4J1V1 117 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 HOXB4P17483 251 aaPredicted RBP12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 RPL27AP46776 148 aaKnown RBP12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 MRGPRG-AS1Q2M3A8 158 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 EXOC3-AS1Q8N2X6 119 aa12.73□□□□□ -0.37
COL4A3BP-204ENST00000405807 CDX4O14627 284 aaPredicted RBP12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 ASIPP42127 132 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 RITA1Q96K30 269 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 LYZP61626 148 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 HERVK_113P63121 156 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 HES1Q14469 280 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 RPRMLQ8N4K4 120 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 ZDBF2Q9HCK1 2354 aa12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 DSPP15924 2871 aaKnown RBP12.72□□□□□ -0.37
COL4A3BP-204ENST00000405807 NDUFA7O95182 113 aa12.71□□□□□ -0.37
COL4A3BP-204ENST00000405807 CACNG7P62955 275 aa12.71□□□□□ -0.37
COL4A3BP-204ENST00000405807 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
COL4A3BP-204ENST00000405807 SLC25A39Q9BZJ4 359 aaPredicted RBP12.71□□□□□ -0.37
COL4A3BP-204ENST00000405807 ICE1Q9Y2F5 2266 aa12.71□□□□□ -0.37
COL4A3BP-204ENST00000405807 LGALS9BQ3B8N2 356 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 LGALS9CQ6DKI2 356 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 TMEM75Q8N9X5 138 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 ARFGEF3Q5TH69 2177 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 CD40P25942 277 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 PSMB2P49721 201 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 NDUFB3O43676 98 aa12.7□□□□□ -0.38
COL4A3BP-204ENST00000405807 TECTAO75443 2155 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 TRBV25-1A0A075B6N4 114 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 TRAV8-2A0A0B4J237 113 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 ORM1P02763 201 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 APELAP0DMC3 54 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 WT1P19544 449 aaPredicted RBP12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 C9orf153Q5TBE3 101 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 BAALCQ8WXS3 180 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 KLK5Q9Y337 293 aaPredicted RBP12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 C10orf126Q8N4M7 172 aa12.69□□□□□ -0.38
COL4A3BP-204ENST00000405807 IGHV3-72A0A0B4J1Y9 119 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 RPS28P62857 69 aaKnown RBP12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 C4orf26Q17RF5 130 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms