RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 PATE1Q8WXA2 126 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 TIMM9Q9Y5J7 89 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 CCDC88CQ9P219 2028 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.45□□□□□ -2.02
CCDC178-204ENST00000403303 IGHV3-73A0A0B4J1V6 119 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 CREBL2O60519 120 aaPredicted RBP2.45□□□□□ -2.02
CCDC178-204ENST00000403303 HTR1AP08908 422 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 CCL3P10147 92 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 MGST1P10620 155 aaKnown RBP2.45□□□□□ -2.02
CCDC178-204ENST00000403303 FOXF1Q12946 379 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 EBPQ15125 230 aaKnown RBP2.45□□□□□ -2.02
CCDC178-204ENST00000403303 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 BCL2L15Q5TBC7 163 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 FAM104AQ969W3 186 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 SCN3AQ9NY46 2000 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 NACAE9PAV3 2078 aa2.45□□□□□ -2.02
CCDC178-204ENST00000403303 GGCTO75223 188 aaKnown RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 AQP4P55087 323 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 FOXA3P55318 350 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 COPZ1P61923 177 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 MORN3Q6PF18 240 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 RPP25LQ8N5L8 163 aaKnown RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 Q8N9P0 234 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 RTN4IP1Q8WWV3 396 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 GPR146Q96CH1 333 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 ADAT3Q96EY9 351 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 IGKV3D-20A0A0C4DH25 116 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 A0A1B0GV50 99 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 LEUTXA8MZ59 168 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 H0YGG7 62 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 M0R378 163 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 UBFD1O14562 309 aaKnown RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 BPY2O14599 106 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 GADD45GO95257 159 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 IGHV1-69P01742 117 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 HINT1P49773 126 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 PYDC2Q56P42 97 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 CLLU1Q5K131 121 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 B9D2Q9BPU9 175 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 MRPL57Q9BQC6 102 aaKnown RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 MRPL32Q9BYC8 188 aaKnown RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 BANF2Q9H503 90 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 HRNRQ86YZ3 2850 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 TRAV4A0A0B4J268 109 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 H3BMG7 143 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 J3QQQ9 107 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 LECT2O14960 151 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 IFNA7P01567 189 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 ZNF141Q15928 474 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 RNASE10Q5GAN6 216 aaKnown RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 AGTRAPQ6RW13 159 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 LINC00305Q7Z4B0 112 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 ISOC1Q96CN7 298 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 SPIN2AQ99865 258 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 SPIN2BQ9BPZ2 258 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 TAF9BQ9HBM6 251 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 MARCOQ9UEW3 520 aaPredicted RBP2.44□□□□□ -2.02
CCDC178-204ENST00000403303 TMEM14AQ9Y6G1 99 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 LOC400499M0QZD8 3231 aa2.44□□□□□ -2.02
CCDC178-204ENST00000403303 DNAH1Q9P2D7 4330 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 CHD3Q12873 2000 aaKnown RBP2.43□□□□□ -2.02
CCDC178-204ENST00000403303 TMEM250H0YL14 139 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 H3BQ85 93 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 AIPO00170 330 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 CRHBPP24387 322 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 HBBP68871 147 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 SLC48A1Q6P1K1 146 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 LCA10Q71F78 164 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 C3orf56Q8N813 242 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 C1orf54Q8WWF1 131 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 LINC00588Q9Y4M8 146 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 HEY1Q9Y5J3 304 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 OTOGQ6ZRI0 2925 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 TRAV38-1A0A0B4J264 116 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 C17orf98A8MV24 154 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 SCGB1A1P11684 91 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 S100A7L2Q5SY68 101 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 ZFAND6Q6FIF0 208 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 DPPA3Q6W0C5 159 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 HIST3H2BBQ8N257 126 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 KLK5Q9Y337 293 aaPredicted RBP2.43□□□□□ -2.02
CCDC178-204ENST00000403303 FAT2Q9NYQ8 4349 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 VPS13DQ5THJ4 4388 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 ZFHX3Q15911 3703 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 OR51F1A6NGY5 319 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 RPL36A-HNRNPH2H7BZ11 118 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 RER1O15258 196 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 PFDN1O60925 122 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 IL4P05112 153 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 AZU1P20160 251 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 SH2D6Q7Z4S9 175 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 DEFB119Q8N690 84 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 C15orf56Q8N910 161 aa2.43□□□□□ -2.02
CCDC178-204ENST00000403303 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
CCDC178-204ENST00000403303 GOLGA4Q13439 2230 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms