RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TCTAP57738 103 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 DAD1P61803 113 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 GFI1BQ5VTD9 330 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 FAM167A-AS1Q96KT0 104 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 ATP5SQ99766 215 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 WFDC1Q9HC57 220 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 TMEM14CQ9P0S9 112 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 HSPB11Q9Y547 144 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 TIMM9Q9Y5J7 89 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 TRAV12-3A0A0B4J271 114 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 TEX48A0A1B0GUV7 120 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 ICAM4Q14773 271 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 GUK1Q16774 197 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 FFAR4Q5NUL3 377 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 FAM122CQ6P4D5 195 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 PHYHIPLQ96FC7 376 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 NDUFAF3Q9BU61 184 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR51M1Q9H341 326 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 PLA2G2DQ9UNK4 145 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 FUT9Q9Y231 359 aa4.08□□□□□ -1.76
HMGB1P20-201ENST00000402555 LYRM9A8MSI8 78 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 C17orf112F2Z3M2 114 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR7C2O60412 319 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZNF253O75346 499 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 PTTG1O95997 202 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 IFNA5P01569 189 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 PLA2G1BP04054 148 aaKnown RBP4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 NBEAP1P0C6P0 100 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 PET100P0DJ07 73 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 TSPOP30536 169 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 LEPP41159 167 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 TAS2R60P59551 318 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 RAB2AP61019 212 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 OXA1LQ15070 435 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 Q5BKY6 102 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 TMEM88Q6PEY1 159 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 Q6ZQT7 251 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 TMEM256Q8N2U0 113 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 SCGB1C1Q8TD33 95 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 FXYD5Q96DB9 178 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZNF503Q96F45 646 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 VGLL1Q99990 258 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 PAXXQ9BUH6 204 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 MRPL32Q9BYC8 188 aaKnown RBP4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 AGPAT4-IT1Q9H0P7 198 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 MED28Q9H204 178 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 NOP10Q9NPE3 64 aaKnown RBP4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 KCNIP2Q9NS61 270 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 NACAE9PAV3 2078 aa4.07□□□□□ -1.76
HMGB1P20-201ENST00000402555 DNAH17Q9UFH2 4485 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 C7orf71A4D174 169 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 F5H768 121 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 H7BYZ3 331 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 M0R2N4 97 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 HMGB3O15347 200 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 RNASE4P34096 147 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 RANP62826 216 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 UBE2L3P68036 154 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 CD300CQ08708 224 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 BTN1A1Q13410 526 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 PDE6HQ13956 83 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 PRR9Q5T870 116 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 POM121L12Q8N7R1 296 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 Q8TAT8 98 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 RNASE8Q8TDE3 154 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 TMEM263Q8WUH6 116 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 MRPL53Q96EL3 112 aaKnown RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 C16orf74Q96GX8 76 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 ODF3Q96PU9 254 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 AAMDCQ9H7C9 122 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 PRELID1Q9Y255 219 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 TIMM8BQ9Y5J9 83 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 HECTD4Q9Y4D8 3996 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 DNAH2Q9P225 4427 aa4.06□□□□□ -1.76
HMGB1P20-201ENST00000402555 MUC4Q99102 2169 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 IGLV2-18A0A075B6J9 118 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 GAGE12BA1L429 117 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 KLLNB2CW77 178 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 GAGE7O76087 117 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 SLC25A5P05141 298 aaKnown RBP4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 ATP5G1P05496 136 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 GAGE12FP0CL80 117 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 GAGE12GP0CL81 117 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 GAGE12IP0CL82 117 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 P0DMU3 169 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 FAM231AP0DMU4 169 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 FAM231CP0DMU5 169 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 ATP5G3P48201 142 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 TMEM78Q5T7P6 136 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZNF493Q6ZR52 646 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 C9orf47Q6ZRZ4 202 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 UBE2DNLQ8IWF7 75 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 CCDC28AQ8IWP9 274 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZFAND2AQ8N6M9 145 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 HSD17B11Q8NBQ5 300 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 FAM210BQ96KR6 192 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms