RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CTSZQ9UBR2 303 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 FAM231BA6NCW3 169 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 GHRHP01286 108 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 C18orf32Q8TCD1 76 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 CT83Q5H943 113 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 FAM120AOSQ5T036 256 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 FGF23Q9GZV9 251 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-204ENST00000400337 KLK9Q9UKQ9 250 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 FAM208BQ5VWN6 2430 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 MUC6Q6W4X9 2439 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 IGLC1P0CG04 106 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 ZNF114Q8NC26 417 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-204ENST00000400337 S100A7L2Q5SY68 101 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 RASL10AQ92737 203 aa14.48□□□□□ -0.09
COL18A1-204ENST00000400337 PRSS46E5RG02 174 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 DENND4CQ5VZ89 1909 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 SPRNQ5BIV9 151 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 FAM104BQ5XKR9 115 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 PRR25Q96S07 402 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 NUP210Q8TEM1 1887 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-204ENST00000400337 NDUFA4O00483 81 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 PAX4O43316 350 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 IGFL2Q6UWQ7 119 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 C1orf122Q6ZSJ8 110 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 TRAV8-4A0A0B4J246 113 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 ATXN8Q156A1 80 aa14.47□□□□□ -0.09
COL18A1-204ENST00000400337 IL15RAQ13261 267 aa14.46□□□□□ -0.09
COL18A1-204ENST00000400337 TMEM14CQ9P0S9 112 aa14.46□□□□□ -0.09
COL18A1-204ENST00000400337 V9GYV3 84 aa14.46□□□□□ -0.09
COL18A1-204ENST00000400337 POU2AF1Q16633 256 aa14.46□□□□□ -0.09
COL18A1-204ENST00000400337 SPXQ9BT56 116 aa14.46□□□□□ -0.09
COL18A1-204ENST00000400337 DLEU1O43261 78 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 TCTEX1D4Q5JR98 221 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 TRPT1Q86TN4 253 aaKnown RBP14.45□□□□□ -0.1
COL18A1-204ENST00000400337 STPG4Q8N801 248 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 TCF15Q12870 199 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 SSBP2P81877 361 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-204ENST00000400337 C6orf226Q5I0X4 101 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 THAP8Q8NA92 274 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 SIGMAR1Q99720 223 aa14.45□□□□□ -0.1
COL18A1-204ENST00000400337 TDGF1P3P51864 188 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 JPT2Q9H910 190 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 ZNF124Q15973 351 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 ASPHD1Q5U4P2 390 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 LY6G5BQ8NDX9 201 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 FXYD5Q96DB9 178 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 DKK4Q9UBT3 224 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 TRAV12-2A0A075B6T6 113 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 IGHV2-70P01814 119 aa14.44□□□□□ -0.1
COL18A1-204ENST00000400337 C3orf56Q8N813 242 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 FAM231DQ6ZW35 169 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 UBE2DNLQ8IWF7 75 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 TIMM21Q9BVV7 248 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 IGHV3-16A0A0C4DH30 117 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 J3QLI3 93 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 SLAQ13239 276 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 KIR3DS1Q14943 382 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 TP53TG1Q9Y2A0 90 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 PRR20EP86478 221 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 PRR20CP86479 221 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 PRR20DP86480 221 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 PRR20BP86481 221 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 PRR20AP86496 221 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 CFHR3Q02985 330 aa14.43□□□□□ -0.1
COL18A1-204ENST00000400337 CST9LQ9H4G1 147 aa14.42□□□□□ -0.1
COL18A1-204ENST00000400337 IGHV2-5P01817 119 aa14.42□□□□□ -0.1
COL18A1-204ENST00000400337 ANXA2RQ3ZCQ2 193 aa14.42□□□□□ -0.1
COL18A1-204ENST00000400337 GATD1Q8NB37 220 aa14.42□□□□□ -0.1
COL18A1-204ENST00000400337 IGHV1OR15-1A0A075B7D0 117 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 PRSS57Q6UWY2 283 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 C2orf66Q6UXQ4 117 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 POLR3KQ9Y2Y1 108 aaPredicted RBP14.41□□□□□ -0.1
COL18A1-204ENST00000400337 A8MWP6 167 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 ESDP10768 282 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 ZNF491Q8N8L2 437 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 ZC2HC1AQ96GY0 325 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 MED13Q9UHV7 2174 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 IGLC7A0M8Q6 106 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 MRPL51Q4U2R6 128 aaKnown RBP14.41□□□□□ -0.1
COL18A1-204ENST00000400337 IGFBPL1Q8WX77 278 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 TRAV26-2A0A0B4J265 109 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 HOXB4P17483 251 aaPredicted RBP14.41□□□□□ -0.1
COL18A1-204ENST00000400337 PRIMA1Q86XR5 153 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 CHAC1Q9BUX1 264 aa14.41□□□□□ -0.1
COL18A1-204ENST00000400337 GAGE12JA6NER3 117 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 LHBP01229 141 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 GAGE1Q13065 139 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 GAGE4Q13068 117 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 GAGE5Q13069 117 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 Q71RC1 249 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-204ENST00000400337 SMIM27A0A1W2PRY6 76 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 RHODO00212 210 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 KRTAP27-1Q3LI81 207 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 C10orf91Q5T1B1 145 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 MYMXA0A1B0GTQ4 84 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 CDKN1BP46527 198 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 C8orf31Q8N9H6 132 aa14.4□□□□□ -0.1
COL18A1-204ENST00000400337 C11orf52Q96A22 123 aa14.4□□□□□ -0.11
COL18A1-204ENST00000400337 Q8N8P6 123 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms