RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PPT1P50897 306 aa12.83□□□□□ -0.36
CTNS-203ENST00000399306 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
CTNS-203ENST00000399306 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.36
CTNS-203ENST00000399306 FAM19A4Q96LR4 140 aa12.83□□□□□ -0.36
CTNS-203ENST00000399306 TCEAL7Q9BRU2 100 aa12.83□□□□□ -0.36
CTNS-203ENST00000399306 AGPAT4-IT1Q9H0P7 198 aa12.83□□□□□ -0.36
CTNS-203ENST00000399306 C11orf68Q9H3H3 251 aaKnown RBP12.83□□□□□ -0.36
CTNS-203ENST00000399306 FBLL1A6NHQ2 334 aaKnown RBP12.82□□□□□ -0.36
CTNS-203ENST00000399306 H2AFB1P0C5Y9 115 aa12.82□□□□□ -0.36
CTNS-203ENST00000399306 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
CTNS-203ENST00000399306 CRISP2P16562 243 aa12.82□□□□□ -0.36
CTNS-203ENST00000399306 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
CTNS-203ENST00000399306 TEX46H3BTG2 121 aa12.81□□□□□ -0.36
CTNS-203ENST00000399306 M0R2Z0 102 aa12.81□□□□□ -0.36
CTNS-203ENST00000399306 ZNF138P52744 262 aa12.81□□□□□ -0.36
CTNS-203ENST00000399306 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
CTNS-203ENST00000399306 SFT2D1Q8WV19 159 aa12.81□□□□□ -0.36
CTNS-203ENST00000399306 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
CTNS-203ENST00000399306 X6R8D5 127 aa12.81□□□□□ -0.36
CTNS-203ENST00000399306 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
CTNS-203ENST00000399306 FAM74A7A6NL05 159 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 GGTLC3B5MD39 225 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 K7EQM0 130 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
CTNS-203ENST00000399306 HBE1P02100 147 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 FXYD7P58549 80 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 SUMO1P63165 101 aaKnown RBP12.8□□□□□ -0.36
CTNS-203ENST00000399306 IQCF2Q8IXL9 164 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 Q8NAQ8 132 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 VGLL1Q99990 258 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 TMPRSS5Q9H3S3 457 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 EPDR1Q9UM22 224 aa12.8□□□□□ -0.36
CTNS-203ENST00000399306 TMEM189A5PLL7 270 aa12.79□□□□□ -0.36
CTNS-203ENST00000399306 KLLNB2CW77 178 aa12.79□□□□□ -0.36
CTNS-203ENST00000399306 NKX2-5P52952 324 aaPredicted RBP12.79□□□□□ -0.36
CTNS-203ENST00000399306 ERCC8Q13216 396 aa12.79□□□□□ -0.36
CTNS-203ENST00000399306 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
CTNS-203ENST00000399306 TCRAP04437 139 aa12.78□□□□□ -0.36
CTNS-203ENST00000399306 HIST1H2BAQ96A08 127 aa12.78□□□□□ -0.36
CTNS-203ENST00000399306 ATG101Q9BSB4 218 aa12.78□□□□□ -0.36
CTNS-203ENST00000399306 H7BYZ3 331 aa12.77□□□□□ -0.37
CTNS-203ENST00000399306 GOLT1AQ6ZVE7 132 aa12.77□□□□□ -0.37
CTNS-203ENST00000399306 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
CTNS-203ENST00000399306 CYB561D1Q8N8Q1 229 aa12.77□□□□□ -0.37
CTNS-203ENST00000399306 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
CTNS-203ENST00000399306 YTHDF2Q9Y5A9 579 aaKnown RBP12.77□□□□□ -0.37
CTNS-203ENST00000399306 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 IGHV4-28A0A0C4DH34 117 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 A0A0J9YWU9 116 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 F6UZH7 168 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 TAS2R60P59551 318 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 TMEM75Q8N9X5 138 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 TMEM208Q9BTX3 173 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 MANBALQ9NQG1 85 aa12.76□□□□□ -0.37
CTNS-203ENST00000399306 C7orf71A4D174 169 aa12.75□□□□□ -0.37
CTNS-203ENST00000399306 UBE2G2P60604 165 aa12.75□□□□□ -0.37
CTNS-203ENST00000399306 BLOC1S1P78537 153 aa12.75□□□□□ -0.37
CTNS-203ENST00000399306 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
CTNS-203ENST00000399306 LINC00467Q9BRT7 94 aa12.75□□□□□ -0.37
CTNS-203ENST00000399306 TEX48A0A1B0GUV7 120 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 IFNA7P01567 189 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 GPX1P07203 203 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 RBMY1A1P0DJD3 496 aaKnown RBP12.74□□□□□ -0.37
CTNS-203ENST00000399306 RBMY1CP0DJD4 496 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 PRB4P10163 310 aaPredicted RBP12.74□□□□□ -0.37
CTNS-203ENST00000399306 GNG5P63218 68 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 RBMY1FQ15415 496 aaKnown RBP12.74□□□□□ -0.37
CTNS-203ENST00000399306 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 NIPSNAP3BQ9BS92 247 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
CTNS-203ENST00000399306 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 PEX7O00628 323 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 PAGE4O60829 102 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 ZNF324O75467 553 aaPredicted RBP12.73□□□□□ -0.37
CTNS-203ENST00000399306 TAGLN2P37802 199 aaKnown RBP12.73□□□□□ -0.37
CTNS-203ENST00000399306 ALKAL2Q6UX46 152 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 ZNF493Q6ZR52 646 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 MUC7Q8TAX7 377 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 LINC01587Q99440 93 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 NDFIP1Q9BT67 221 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
CTNS-203ENST00000399306 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 TRBV6-1A0A0K0K1D8 114 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 IFNA1P01562 189 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 SAPCD1Q5SSQ6 148 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 CST9LP1Q5W188 147 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 Q6AWC8 147 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 LYPD6BQ8NI32 183 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 Q8TAT8 98 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
CTNS-203ENST00000399306 LOC102723971A0A1B0GUV8 181 aa12.71□□□□□ -0.37
CTNS-203ENST00000399306 IGLV2-11P01706 119 aa12.71□□□□□ -0.37
CTNS-203ENST00000399306 S100A9P06702 114 aaKnown RBP12.71□□□□□ -0.37
CTNS-203ENST00000399306 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
CTNS-203ENST00000399306 PSG8Q9UQ74 426 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms