RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 IGFL3Q6UXB1 125 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 ADGRG4Q8IZF6 3080 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 TIMM23O14925 209 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 CIDEAO60543 219 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 TNFRSF6BO95407 300 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 FCER1GP30273 86 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 ZC2HC1BQ5TFG8 222 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.66
APOB-202ENST00000399256 TMEM190Q8WZ59 177 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 HIGD1BQ9P298 99 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
APOB-202ENST00000399256 ZGRF1Q86YA3 2104 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 CEACAM3P40198 252 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 ZNF575Q86XF7 245 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 TMEM158Q8WZ71 300 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 ZMAT4Q9H898 229 aa10.9□□□□□ -0.66
APOB-202ENST00000399256 TPRP12270 2363 aaKnown RBP10.9□□□□□ -0.67
APOB-202ENST00000399256 IGHV3OR16-8A0A075B7F1 116 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 CHTOPQ9Y3Y2 248 aaKnown RBP10.89□□□□□ -0.67
APOB-202ENST00000399256 ANKRD11Q6UB99 2663 aaPredicted RBP10.89□□□□□ -0.67
APOB-202ENST00000399256 PIEZO1Q92508 2521 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 A0A0G2JNJ9 132 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 TMEM8BA6NDV4 472 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 CEND1Q8N111 149 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 TMEM160Q9NX00 188 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 Q9UFV3 132 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 BMI1P35226 326 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 WFDC2Q14508 124 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
APOB-202ENST00000399256 TSSC4Q9Y5U2 329 aaPredicted RBP10.89□□□□□ -0.67
APOB-202ENST00000399256 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
APOB-202ENST00000399256 PCNX1Q96RV3 2341 aa10.88□□□□□ -0.67
APOB-202ENST00000399256 DPM2O94777 84 aa10.88□□□□□ -0.67
APOB-202ENST00000399256 ERCC8Q13216 396 aa10.88□□□□□ -0.67
APOB-202ENST00000399256 FAM57AQ8TBR7 257 aa10.88□□□□□ -0.67
APOB-202ENST00000399256 RAB1BQ9H0U4 201 aa10.88□□□□□ -0.67
APOB-202ENST00000399256 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 K7ENP7 123 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 MTURNQ8N3F0 131 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 NXT2Q9NPJ8 142 aaKnown RBP10.87□□□□□ -0.67
APOB-202ENST00000399256 Q6ZS92 163 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 ONECUT1Q9UBC0 465 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 BSNQ9UPA5 3926 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 IGHV3-35A0A0C4DH35 117 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 MFAP4P55083 255 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 SIGMAR1Q99720 223 aa10.87□□□□□ -0.67
APOB-202ENST00000399256 SRSF8Q9BRL6 282 aaKnown RBP10.87□□□□□ -0.67
APOB-202ENST00000399256 SHISA9B4DS77 424 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 IGLL5B9A064 214 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 F8W735 103 aaPredicted RBP10.86□□□□□ -0.67
APOB-202ENST00000399256 NBR2O15453 112 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 IGHG4P01861 327 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 SH2D6Q7Z4S9 175 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 FANCD2OSQ96PS1 177 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 TM2D2Q9BX73 214 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
APOB-202ENST00000399256 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 E7EQL1 145 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 H3BMG7 143 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 RPL7P18124 248 aaKnown RBP10.86□□□□□ -0.67
APOB-202ENST00000399256 AMTNQ6UX39 209 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
APOB-202ENST00000399256 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
APOB-202ENST00000399256 LINC01546A6NGU7 62 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 E9PLD3 99 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 HES1Q14469 280 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 ZNF479Q96JC4 524 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 GAGE12HA6NDE8 117 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 LY6LH3BQJ8 138 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 IGF2RP11717 2491 aa10.85□□□□□ -0.67
APOB-202ENST00000399256 VSTM5A8MXK1 200 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 ATP5LO75964 103 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 DYNAPQ8N1N2 210 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 PTPRQQ9UMZ3 2332 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 IGLV11-55A0A075B6I3 123 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 TRAV26-2A0A0B4J265 109 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 FABP5P3A8MUU1 101 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 TRGV3P03979 118 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 ETDBQ3ZM63 59 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 FOXI2Q6ZQN5 318 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 RNF5Q99942 180 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 C21orf62Q9NYP8 219 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 ATMQ13315 3056 aa10.84□□□□□ -0.67
APOB-202ENST00000399256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
APOB-202ENST00000399256 C12orf74Q32Q52 190 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 CD300EQ496F6 205 aaPredicted RBP10.83□□□□□ -0.68
APOB-202ENST00000399256 PSMG4Q5JS54 123 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 Q8N8P6 123 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 PSMG3-AS1Q96PY0 264 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 NDUFA3O95167 84 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 IL17RELQ6ZVW7 336 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 RNF182Q8N6D2 247 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms