RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LY6G6CO95867 125 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 ARL14EPLP0DKL9 152 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 LEPP41159 167 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TAS2R60P59551 318 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 SERF2P84101 59 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 PQLC2Q6ZP29 291 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 C9orf47Q6ZRZ4 202 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 LYPD1Q8N2G4 141 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 OR11H4Q8NGC9 324 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 RAB24Q969Q5 203 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 HYLS1Q96M11 299 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 LINC00477Q96M19 166 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 ODF3Q96PU9 254 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 H7BYZ3 331 aa10.03□□□□□ -0.8
HLA-DQB1-202ENST00000399079 CD300CQ08708 224 aa10.03□□□□□ -0.8
HLA-DQB1-202ENST00000399079 FAM19A4Q96LR4 140 aa10.03□□□□□ -0.8
HLA-DQB1-202ENST00000399079 NIPSNAP3BQ9BS92 247 aa10.03□□□□□ -0.8
HLA-DQB1-202ENST00000399079 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
HLA-DQB1-202ENST00000399079 STAG3L2P0CL84 134 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 STAG3L3P0CL85 134 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 CSN1S1P47710 185 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 SSX7Q7RTT5 188 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 Q8TAT8 98 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.8
HLA-DQB1-202ENST00000399079 KMT2AQ03164 3969 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 PGPA6NDG6 321 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 KLLNB2CW77 178 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 MBP02144 154 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 PRR9Q5T870 116 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 Q6ZQT7 251 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 RNASE8Q8TDE3 154 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZNF492Q9P255 531 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 APLNQ9ULZ1 77 aa10.02□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 C7orf71A4D174 169 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TAAR5O14804 337 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 GPX1P07203 203 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 HTN3P15516 51 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 DAD1P61803 113 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 C16orf74Q96GX8 76 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 OTORQ9NRC9 128 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 RPH3ALQ9UNE2 315 aa10.01□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZNF324O75467 553 aaPredicted RBP10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 DEFB130BP0DP73 79 aa10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 DEFB130AP0DP74 79 aa10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 CRISP2P16562 243 aa10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 GCHFRP30047 84 aa10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZNF138P52744 262 aa10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZNF726P1Q15940 193 aa10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TMEM263Q8WUH6 116 aaKnown RBP10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ACTR3CQ9C0K3 210 aaPredicted RBP10□□□□□ -0.81
HLA-DQB1-202ENST00000399079 RBAKDNA6NC62 111 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 GNG5P63218 68 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZNF493Q6ZR52 646 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 KCNRGQ8N5I3 272 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 CMTM2Q8TAZ6 248 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 RXFP4Q8TDU9 374 aa9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TIMM8BQ9Y5J9 83 aaPredicted RBP9.99□□□□□ -0.81
HLA-DQB1-202ENST00000399079 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ZNF345Q14585 488 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 FAM74A1Q5RGS3 127 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 CCDC28AQ8IWP9 274 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 IQCF2Q8IXL9 164 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ARPC5LQ9BPX5 153 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 PYGO2Q9BRQ0 406 aa9.98□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TRAV8-1A0A0A6YYK1 113 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 CXorf1O96002 111 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 NMBP08949 121 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TCTAP57738 103 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 AKR1C8PQ5T2L2 129 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 GOLT1AQ6ZVE7 132 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 ST6GAL2Q96JF0 529 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 TMPRSS5Q9H3S3 457 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 Q6ZNX1 250 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
HLA-DQB1-202ENST00000399079 CTXND1A0A1B0GTU2 59 aa9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 FHITP49789 147 aa9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 FGF8P55075 233 aaPredicted RBP9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 SUMO1P63165 101 aaKnown RBP9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 NDUFAF3Q9BU61 184 aa9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 GSN-AS1Q9NRJ2 163 aa9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TP53TG3Q9ULZ0 132 aa9.96□□□□□ -0.82
HLA-DQB1-202ENST00000399079 A0A0D9SG52 128 aa9.95□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
HLA-DQB1-202ENST00000399079 CBY3A6NI87 242 aa9.95□□□□□ -0.82
HLA-DQB1-202ENST00000399079 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms