RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SMIM27A0A1W2PRY6 76 aa11.27□□□□□ -0.61
PCDHGA11-201ENST00000398587 FXYD7P58549 80 aa11.27□□□□□ -0.61
PCDHGA11-201ENST00000398587 ALPK3Q96L96 1907 aa11.27□□□□□ -0.61
PCDHGA11-201ENST00000398587 C1QTNF4Q9BXJ3 329 aa11.27□□□□□ -0.61
PCDHGA11-201ENST00000398587 TNFRSF6BO95407 300 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 RPL36AP83881 106 aaKnown RBP11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 ADORA2A-AS1P86434 159 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 RPL36ALQ969Q0 106 aaKnown RBP11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 Q96MF0 132 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 A0A1B0GUS0 222 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 GUSBP1Q15486 140 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 FBXL19-AS1Q494R0 122 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 FAM120AOSQ5T036 256 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
PCDHGA11-201ENST00000398587 SPOCK3Q9BQ16 436 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGF2RP11717 2491 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 PLNP26678 52 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 Q8NA96 180 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 WDR87Q6ZQQ6 2873 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 H3BUA1 57 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 PTPN13Q12923 2485 aa11.25□□□□□ -0.61
PCDHGA11-201ENST00000398587 CENPVL3A0A0U1RRI6 287 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGLV2-14P01704 120 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 SLAQ13239 276 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 TLN1Q9Y490 2541 aaKnown RBP11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
PCDHGA11-201ENST00000398587 TNCP24821 2201 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 ELANEP08246 267 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 ZC2HC1BQ5TFG8 222 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 NPBQ8NG41 125 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 ZC2HC1AQ96GY0 325 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 A0A087WWL8 130 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 LINC01619G3V211 115 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGLV1-47P01700 117 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 CFAP161Q6P656 301 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 UBE2E2Q96LR5 201 aa11.23□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGHV4-61A0A0C4DH41 118 aa11.22□□□□□ -0.61
PCDHGA11-201ENST00000398587 NCKAP5O14513 1909 aa11.22□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGKV1-17P01599 117 aa11.22□□□□□ -0.61
PCDHGA11-201ENST00000398587 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
PCDHGA11-201ENST00000398587 CRIP3Q6Q6R5 217 aa11.22□□□□□ -0.61
PCDHGA11-201ENST00000398587 K7EIM0 57 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 LTAP01374 205 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 C20orf144Q9BQM9 153 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 I3L2K1 104 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 K7EN84 100 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 PIEZO2Q9H5I5 2752 aa11.21□□□□□ -0.61
PCDHGA11-201ENST00000398587 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 INS-IGF2F8WCM5 200 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 VGLL1Q99990 258 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 TRAV2A0A0B4J234 112 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 J3QKU1 62 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 TEX43Q6ZNM6 134 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 ODF3L1Q8IXM7 274 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.62
PCDHGA11-201ENST00000398587 DTX2Q86UW9 622 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 RHODO00212 210 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGHV4-39P01824 125 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 DAZAP2Q15038 168 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 BCL6BQ8N143 479 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 RITA1Q96K30 269 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 PYGO2Q9BRQ0 406 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 C11orf1Q9H5F2 150 aa11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 POLR3KQ9Y2Y1 108 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA11-201ENST00000398587 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 SONP18583 2426 aaKnown RBP11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 PRSS57Q6UWY2 283 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 ZNF479Q96JC4 524 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGHV1OR15-1A0A075B7D0 117 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 TRBV7-9A0A0J9YWB2 115 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 TMEM238C9JI98 176 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 CGB3P0DN86 165 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 CGB7P0DN87 165 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 DEFB112Q30KQ8 113 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms