RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
TTC28-201ENST00000397906 USF3Q68DE3 2245 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 LAMTOR2Q9Y2Q5 125 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 AMBPP02760 352 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 ZNF134P52741 427 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 CYTL1Q9NRR1 136 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 PMVKQ15126 192 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 NDUFA4O00483 81 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 TMEM75Q8N9X5 138 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 SLX1AQ9BQ83 275 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 ANAPC10Q9UM13 185 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 TRAV8-3A0A0A6YYJ7 113 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 PDE6HQ13956 83 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 GUSBP1Q15486 140 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 IGKV1OR2-108A0A075B7D4 117 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 I3L3M4 83 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 Q6ZQT7 251 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 KMT2EQ8IZD2 1858 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 IGLV1-44P01699 117 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 MEGF9Q9H1U4 602 aa9.04□□□□□ -0.96
TTC28-201ENST00000397906 RSPO3Q9BXY4 272 aaPredicted RBP9.03□□□□□ -0.96
TTC28-201ENST00000397906 TMEM126AQ9H061 195 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 ABCA4P78363 2273 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 A0A1B0GUS0 222 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 ZNF479Q96JC4 524 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 ORAOV1Q8WV07 137 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 CADP27708 2225 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
TTC28-201ENST00000397906 RIF1Q5UIP0 2472 aaKnown RBP9.02□□□□□ -0.96
TTC28-201ENST00000397906 ADORA2A-AS1P86434 159 aa9.02□□□□□ -0.96
TTC28-201ENST00000397906 F6UB75 175 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 SUMO4Q6EEV6 95 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 ESDP10768 282 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 WT1-ASQ06250 92 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 FGF16O43320 207 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 LMO1P25800 156 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 TMEM243Q9BU79 118 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 TRBV19A0A075B6N1 114 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 YPEL3P61236 119 aaPredicted RBP9.02□□□□□ -0.97
TTC28-201ENST00000397906 CHAC1Q9BUX1 264 aa9.02□□□□□ -0.97
TTC28-201ENST00000397906 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.97
TTC28-201ENST00000397906 Q6ZS49 121 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 A8MWV9 139 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 CYYR1Q96J86 154 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 ZNF48Q96MX3 618 aaPredicted RBP9.01□□□□□ -0.97
TTC28-201ENST00000397906 ESM1Q9NQ30 184 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 NOTCH4Q99466 2003 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
TTC28-201ENST00000397906 GP9P14770 177 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 IGHV2-70P01814 119 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 ELANEP08246 267 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 RMI2Q96E14 147 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 SNHG12Q9BXW3 62 aa9.01□□□□□ -0.97
TTC28-201ENST00000397906 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
TTC28-201ENST00000397906 RHODO00212 210 aa9□□□□□ -0.97
TTC28-201ENST00000397906 KLF12Q9Y4X4 402 aa9□□□□□ -0.97
TTC28-201ENST00000397906 A0A087X0K7 114 aa9□□□□□ -0.97
TTC28-201ENST00000397906 PIFOQ8TCI5 191 aa9□□□□□ -0.97
TTC28-201ENST00000397906 UBE2BP63146 152 aa9□□□□□ -0.97
TTC28-201ENST00000397906 PKDREJQ9NTG1 2253 aa9□□□□□ -0.97
TTC28-201ENST00000397906 TRAV25A0A0B4J276 109 aa9□□□□□ -0.97
TTC28-201ENST00000397906 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
TTC28-201ENST00000397906 C15orf65H3BRN8 121 aa9□□□□□ -0.97
TTC28-201ENST00000397906 TMEM256Q8N2U0 113 aa9□□□□□ -0.97
TTC28-201ENST00000397906 GSN-AS1Q9NRJ2 163 aa9□□□□□ -0.97
TTC28-201ENST00000397906 HSD52Q0P140 79 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 XCL1P47992 114 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 KLF5Q13887 457 aaPredicted RBP8.99□□□□□ -0.97
TTC28-201ENST00000397906 ATP6V0BQ99437 205 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 TRAV1-1A0A0B4J248 108 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 LGALS1P09382 135 aaKnown RBP8.99□□□□□ -0.97
TTC28-201ENST00000397906 BLCAPP62952 87 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 H3BRN7 92 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
TTC28-201ENST00000397906 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 FNDC10F2Z333 226 aa8.99□□□□□ -0.97
TTC28-201ENST00000397906 ZFP36P26651 326 aaKnown RBP8.98□□□□□ -0.97
TTC28-201ENST00000397906 GAGE2AQ6NT46 116 aa8.98□□□□□ -0.97
TTC28-201ENST00000397906 HLA-DMBP28068 263 aa8.98□□□□□ -0.97
TTC28-201ENST00000397906 C17orf77Q96MU5 243 aa8.98□□□□□ -0.97
TTC28-201ENST00000397906 SPINK8P0C7L1 97 aa8.98□□□□□ -0.97
TTC28-201ENST00000397906 KLF2Q9Y5W3 355 aaPredicted RBP8.98□□□□□ -0.97
TTC28-201ENST00000397906 NCKAP5O14513 1909 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 DEFB4AO15263 64 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms