RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FAM24BQ8N5W8 94 aa14.58□□□□□ -0.08
PDLIM2-205ENST00000397761 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
PDLIM2-205ENST00000397761 AGRNO00468 2067 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 PRB4P10163 310 aaPredicted RBP14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 SNRPD3P62318 126 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 PRNTQ86SH4 94 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 WFDC3Q8IUB2 231 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 RPS10P5Q9NQ39 176 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 TMEM242Q9NWH2 141 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 OR2K2Q8NGT1 345 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 AGPAT4-IT1Q9H0P7 198 aa14.57□□□□□ -0.08
PDLIM2-205ENST00000397761 NPIPB6E9PJ23 425 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 MT-ND4LP03901 98 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 TFPI2P48307 235 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 RNF212Q495C1 297 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 NHLRC2Q8NBF2 726 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 OR8A1Q8NGG7 326 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 PRR25Q96S07 402 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 CTDSP1Q9GZU7 261 aa14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 ZNF256Q9Y2P7 627 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-205ENST00000397761 IZUMO1RA6ND01 250 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 SAP30O75446 220 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 ZNF688P0C7X2 276 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 ERCC8Q13216 396 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 OR5I1Q13606 314 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 SAPCD1Q5SSQ6 148 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 ANAPC16Q96DE5 110 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 SFRP2Q96HF1 295 aa14.55□□□□□ -0.08
PDLIM2-205ENST00000397761 OR4C46A6NHA9 309 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 PSMG4Q5JS54 123 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 FAM231DQ6ZW35 169 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 BIN3Q9NQY0 253 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 OSTCQ9NRP0 149 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 ZNF492Q9P255 531 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 LENEPQ9Y5L5 61 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 ANK2Q01484 3957 aa14.54□□□□□ -0.08
PDLIM2-205ENST00000397761 MGST1P10620 155 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-205ENST00000397761 ZNF138P52744 262 aa14.53□□□□□ -0.08
PDLIM2-205ENST00000397761 TMEM78Q5T7P6 136 aa14.53□□□□□ -0.08
PDLIM2-205ENST00000397761 OR10J6PQ8NGY7 276 aa14.53□□□□□ -0.08
PDLIM2-205ENST00000397761 Q8TAT8 98 aa14.53□□□□□ -0.08
PDLIM2-205ENST00000397761 LINC00477Q96M19 166 aa14.53□□□□□ -0.08
PDLIM2-205ENST00000397761 NOTCH3Q9UM47 2321 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 PPP1R2P9O14990 202 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 DEFB1P60022 68 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 SHISA2Q6UWI4 295 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 WFDC9Q8NEX5 89 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 ZC2HC1AQ96GY0 325 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 GPR61Q9BZJ8 451 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 TUBA4BQ9H853 241 aa14.52□□□□□ -0.08
PDLIM2-205ENST00000397761 TRBV7-9A0A0J9YWB2 115 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 A0A0J9YX75 114 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 C19orf71A6NCJ1 209 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 CXorf65A6NEN9 183 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 F6UB75 175 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 INSL3P51460 131 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 BTN1A1Q13410 526 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 C3orf56Q8N813 242 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 OR10G8Q8NGN5 311 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 FAM19A4Q96LR4 140 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 C8orf49Q96NF6 230 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 SMCO4Q9NRQ5 59 aa14.51□□□□□ -0.09
PDLIM2-205ENST00000397761 ZNF705DP0CH99 300 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 ZNF705BP0CI00 300 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 TMEM88Q6PEY1 159 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 C12orf54Q6X4T0 127 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 LINC00322Q6ZN03 302 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 FOXI2Q6ZQN5 318 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 CBLN2Q8IUK8 224 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 ASCL2Q99929 193 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 NDFIP1Q9BT67 221 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 H7BYZ3 331 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 CT45A10P0DMU9 189 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 ERVFC1-1P60608 527 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 HIST1H1AQ02539 215 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 IBA57Q5T440 356 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 RNASE7Q9H1E1 156 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 SAV1Q9H4B6 383 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 MAP6D1Q9H9H5 199 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 V9GYV3 84 aa14.5□□□□□ -0.09
PDLIM2-205ENST00000397761 A8MTW9 85 aa14.49□□□□□ -0.09
PDLIM2-205ENST00000397761 GDF5OSQ5U4N7 250 aa14.49□□□□□ -0.09
PDLIM2-205ENST00000397761 C15orf54Q8N8G6 183 aa14.49□□□□□ -0.09
PDLIM2-205ENST00000397761 ODF3Q96PU9 254 aa14.49□□□□□ -0.09
PDLIM2-205ENST00000397761 CRIP1P50238 77 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 BEAN1Q3B7T3 259 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 ODF3L2Q3SX64 289 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 C9orf66Q5T8R8 295 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 NUDT10Q8NFP7 164 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 NUDT11Q96G61 164 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 YPEL4Q96NS1 127 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 FAM110AQ9BQ89 295 aa14.48□□□□□ -0.09
PDLIM2-205ENST00000397761 CRISP2P16562 243 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 DEFB131AP59861 70 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 SMUG1Q53HV7 270 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 PRR27Q6MZM9 219 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 EBLN2Q6P2I7 272 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 APRG1Q8IVJ8 170 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 IMMP2LQ96T52 175 aa14.47□□□□□ -0.09
PDLIM2-205ENST00000397761 MCRIP2Q9BUT9 160 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms