RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FAM162BQ5T6X4 162 aa14.86□□□□□ -0.03
PDLIM2-204ENST00000397760 NRN1Q9NPD7 142 aa14.86□□□□□ -0.03
PDLIM2-204ENST00000397760 OTORQ9NRC9 128 aa14.86□□□□□ -0.03
PDLIM2-204ENST00000397760 A0A1B0GXF2 115 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 A8MWL6 223 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 RELQ04864 619 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 ZNF414Q96IQ9 312 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 CA1P00915 261 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 TCRAP04437 139 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 KIAA1644Q3SXP7 199 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 C18orf32Q8TCD1 76 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 BLNKQ8WV28 456 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 UBE2E2Q96LR5 201 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 NEU1Q99519 415 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 Q9H3A6 140 aa14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 RPP21Q9H633 154 aaKnown RBP14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 PEF1Q9UBV8 284 aaKnown RBP14.85□□□□□ -0.03
PDLIM2-204ENST00000397760 C19orf71A6NCJ1 209 aa14.84□□□□□ -0.03
PDLIM2-204ENST00000397760 HIGD1CA8MV81 97 aa14.84□□□□□ -0.03
PDLIM2-204ENST00000397760 NUTF2P61970 127 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-204ENST00000397760 GNG5P63218 68 aa14.84□□□□□ -0.03
PDLIM2-204ENST00000397760 SLAQ13239 276 aa14.84□□□□□ -0.03
PDLIM2-204ENST00000397760 SNHG12Q9BXW3 62 aa14.84□□□□□ -0.03
PDLIM2-204ENST00000397760 TCTEX1D4Q5JR98 221 aa14.83□□□□□ -0.04
PDLIM2-204ENST00000397760 RCHY1Q96PM5 261 aa14.83□□□□□ -0.04
PDLIM2-204ENST00000397760 DIRC3C9JPN6 131 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 S100A7AQ86SG5 101 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 Q8N976 141 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 SLC25A39Q9BZJ4 359 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 ZFAND3Q9H8U3 227 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 IGHV3OR16-8A0A075B7F1 116 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 EREGO14944 169 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 LGALS1P09382 135 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 PRR27Q6MZM9 219 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 LYPD1Q8N2G4 141 aa14.82□□□□□ -0.04
PDLIM2-204ENST00000397760 NPIPB6E9PJ23 425 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 P01737 135 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 CD33P20138 364 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 KRTDAPP60985 99 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 HBBP68871 147 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 DMRTA1Q5VZB9 504 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 ALKBH7Q9BT30 221 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 RNF114Q9Y508 228 aa14.81□□□□□ -0.04
PDLIM2-204ENST00000397760 HAX1O00165 279 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 LEMD1Q68G75 181 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 NIT1Q86X76 327 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 RABAC1Q9UI14 185 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 H3BRN7 92 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 NDUFA4O00483 81 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 KHDC1LQ5JSQ8 128 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 GDF5OSQ5U4N7 250 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 BORCS7Q96B45 105 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 DAZAP1Q96EP5 407 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 SHANK2-AS3Q9BTD1 123 aa14.8□□□□□ -0.04
PDLIM2-204ENST00000397760 CLPSL1A2RUU4 121 aa14.79□□□□□ -0.04
PDLIM2-204ENST00000397760 PMCHP20382 165 aa14.79□□□□□ -0.04
PDLIM2-204ENST00000397760 NF1P21359 2839 aa14.79□□□□□ -0.04
PDLIM2-204ENST00000397760 CTRLP40313 264 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 PMCHL1Q16048 86 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 TDRG1Q3Y452 100 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 ZNF705AQ6ZN79 300 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 RBPMS2Q6ZRY4 209 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 Q86TA4 180 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 BPIFA4PQ86YQ2 179 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 PAM16Q9Y3D7 125 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 C3orf79P0CE67 100 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 CD28P10747 220 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 C16orf54Q6UWD8 224 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 C18orf65Q6ZTR6 163 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 C11orf44Q8N8P7 122 aa14.78□□□□□ -0.04
PDLIM2-204ENST00000397760 HSBP1O75506 76 aa14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 FOXA3P55318 350 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 PROK1P58294 105 aa14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 HIST2H2BDQ6DRA6 164 aa14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 UNQ9165/PRO28630Q6UXU0 137 aa14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 C4orf3Q8WVX3 66 aa14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 ZFP30Q9Y2G7 519 aa14.77□□□□□ -0.05
PDLIM2-204ENST00000397760 TCAPO15273 167 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 ZNF207O43670 478 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 S100A7P31151 101 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 TMEM75Q8N9X5 138 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 OR4F17Q8NGA8 305 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 METTL26Q96S19 204 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 TRBV19A0A075B6N1 114 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 IGHV4OR15-8A0A075B7B6 117 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 A0A087WW49 117 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 C20orf202A1L168 122 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 K7EQM0 130 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 FAM106AQ4KMX7 169 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 LINC00322Q6ZN03 302 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 GPHB5Q86YW7 130 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 RPH3ALQ9UNE2 315 aa14.76□□□□□ -0.05
PDLIM2-204ENST00000397760 IGLV2-11P01706 119 aa14.75□□□□□ -0.05
PDLIM2-204ENST00000397760 KLHL30-AS1Q8NEE0 82 aa14.75□□□□□ -0.05
PDLIM2-204ENST00000397760 GTSF1Q8WW33 167 aa14.75□□□□□ -0.05
PDLIM2-204ENST00000397760 WFDC12Q8WWY7 111 aa14.75□□□□□ -0.05
PDLIM2-204ENST00000397760 CHCHD1Q96BP2 118 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-204ENST00000397760 IGLC2P0DOY2 106 aa14.74□□□□□ -0.05
PDLIM2-204ENST00000397760 CAMPP49913 170 aa14.74□□□□□ -0.05
PDLIM2-204ENST00000397760 PDE6HQ13956 83 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms