RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 C2CD3Q4AC94 2353 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 CRIP1P50238 77 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 ERCC8Q13216 396 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 ZC2HC1AQ96GY0 325 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
TRIM39-204ENST00000396548 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 OR10G8Q8NGN5 311 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 PRR25Q96S07 402 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 C8orf49Q96NF6 230 aa9.53□□□□□ -0.88
TRIM39-204ENST00000396548 NPIPB6E9PJ23 425 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 RPL11P62913 178 aaKnown RBP9.52□□□□□ -0.89
TRIM39-204ENST00000396548 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 PYGO2Q9BRQ0 406 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 GPR61Q9BZJ8 451 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 OVOL1O14753 267 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.89
TRIM39-204ENST00000396548 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
TRIM39-204ENST00000396548 H7BYZ3 331 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 CXCL1P09341 107 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 IBA57Q5T440 356 aaKnown RBP9.51□□□□□ -0.89
TRIM39-204ENST00000396548 IGKV3-7A0A075B6H7 116 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 ERVFC1-1P60608 527 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF575Q86XF7 245 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 PRIMA1Q86XR5 153 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 Q8TAT8 98 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 DEFB1P60022 68 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 TMEM61Q8N0U2 210 aa9.51□□□□□ -0.89
TRIM39-204ENST00000396548 M0QZ24 198 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 SAPCD1Q5SSQ6 148 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 TGIF2-C20orf24A0A0A6YYL0 155 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 ID1P41134 155 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF80P51504 273 aaPredicted RBP9.5□□□□□ -0.89
TRIM39-204ENST00000396548 KRTAP24-1Q3LI83 254 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 IL36BQ9NZH7 164 aa9.5□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF256Q9Y2P7 627 aaPredicted RBP9.5□□□□□ -0.89
TRIM39-204ENST00000396548 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 CT45A10P0DMU9 189 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
TRIM39-204ENST00000396548 LINC00482Q8N8I6 264 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 BIN3Q9NQY0 253 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 ANK2Q01484 3957 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF705DP0CH99 300 aaPredicted RBP9.49□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF705BP0CI00 300 aaPredicted RBP9.49□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF138P52744 262 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 OR8A1Q8NGG7 326 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 URGCP-MRPS24S4R325 110 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 VWFP04275 2813 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 TRAV25A0A0B4J276 109 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 IZUMO1RA6ND01 250 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 F6UB75 175 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 WFDC3Q8IUB2 231 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
TRIM39-204ENST00000396548 SETD2Q9BYW2 2564 aaPredicted RBP9.48□□□□□ -0.89
TRIM39-204ENST00000396548 GDF5OSQ5U4N7 250 aa9.48□□□□□ -0.89
TRIM39-204ENST00000396548 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
TRIM39-204ENST00000396548 CT83Q5H943 113 aa9.48□□□□□ -0.89
TRIM39-204ENST00000396548 PRR27Q6MZM9 219 aa9.48□□□□□ -0.89
TRIM39-204ENST00000396548 C12orf57Q99622 126 aa9.48□□□□□ -0.89
TRIM39-204ENST00000396548 TFPI2P48307 235 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 TEP1Q99973 2627 aaKnown RBP9.47□□□□□ -0.89
TRIM39-204ENST00000396548 TRRAPQ9Y4A5 3859 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 IGLV1-51P01701 117 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 RAB5AP20339 215 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
TRIM39-204ENST00000396548 TMEM78Q5T7P6 136 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 TRBV7-9A0A0J9YWB2 115 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 A0A0J9YX75 114 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 A8MTW9 85 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
TRIM39-204ENST00000396548 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
TRIM39-204ENST00000396548 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
TRIM39-204ENST00000396548 ZNF705GA8MUZ8 300 aaPredicted RBP9.46□□□□□ -0.89
TRIM39-204ENST00000396548 GATCO43716 136 aaKnown RBP9.46□□□□□ -0.89
TRIM39-204ENST00000396548 SNRPD3P62318 126 aaKnown RBP9.46□□□□□ -0.89
TRIM39-204ENST00000396548 PAFAH1B2P68402 229 aa9.46□□□□□ -0.89
TRIM39-204ENST00000396548 PSMG4Q5JS54 123 aa9.46□□□□□ -0.89
TRIM39-204ENST00000396548 PRR9Q5T870 116 aa9.46□□□□□ -0.89
TRIM39-204ENST00000396548 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.89
TRIM39-204ENST00000396548 SPATA3Q8NHX4 192 aa9.46□□□□□ -0.89
TRIM39-204ENST00000396548 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.89
TRIM39-204ENST00000396548 SH2D1AO60880 128 aa9.46□□□□□ -0.9
TRIM39-204ENST00000396548 TYMSP04818 313 aa9.46□□□□□ -0.9
TRIM39-204ENST00000396548 CRISP2P16562 243 aa9.46□□□□□ -0.9
TRIM39-204ENST00000396548 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
TRIM39-204ENST00000396548 OR4B1Q8NGF8 309 aa9.46□□□□□ -0.9
TRIM39-204ENST00000396548 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.9
TRIM39-204ENST00000396548 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms