RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ACACBO00763 2458 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 EGR2P11161 476 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-203ENST00000396547 KLRB1Q12918 225 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 SCGB2A2Q13296 93 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 FAM169BQ8N8A8 192 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 KLK15Q9H2R5 256 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 TRAV40A0A0B4J280 105 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 ATP5G2Q06055 141 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 RNF125Q96EQ8 232 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 VGLL1Q99990 258 aa7.73□□□□□ -1.17
TRIM39-203ENST00000396547 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 IGHV3OR16-13A0A075B7E8 117 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 IGHV3-74A0A0B4J1X5 117 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 NDUFA3O95167 84 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 HES1Q14469 280 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 Q6ZS92 163 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 LINC00574Q9H8X3 128 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 TRBV25-1A0A075B6N4 114 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 GAGE12HA6NDE8 117 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 C17orf100A8MU93 164 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 INS-IGF2F8WCM5 200 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 J3KRW8 73 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 IGHV1-8P0DP01 117 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 INSL3P51460 131 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 ZNF80P51504 273 aaPredicted RBP7.72□□□□□ -1.17
TRIM39-203ENST00000396547 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 DEFB104AQ8WTQ1 72 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 TMEM158Q8WZ71 300 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 RPEQ96AT9 228 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 SHANK2-AS3Q9BTD1 123 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 DYNLRB1Q9NP97 96 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 PTPRQQ9UMZ3 2332 aa7.72□□□□□ -1.17
TRIM39-203ENST00000396547 LOXP28300 417 aaPredicted RBP7.71□□□□□ -1.17
TRIM39-203ENST00000396547 TEX36Q5VZQ5 186 aa7.71□□□□□ -1.17
TRIM39-203ENST00000396547 HIST1H4GQ99525 98 aa7.71□□□□□ -1.17
TRIM39-203ENST00000396547 IGHV3-66A0A0C4DH42 116 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 TEX22C9J3V5 150 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 IGKCP01834 107 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 ERCC8Q13216 396 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 ZNF491Q8N8L2 437 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 ZNF479Q96JC4 524 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 TRAV26-2A0A0B4J265 109 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 A0A1B0GW15 77 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 TMEM178BH3BS89 294 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 MAPKAPK5-AS1Q8N8E1 139 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 UFC1Q9Y3C8 167 aa7.71□□□□□ -1.18
TRIM39-203ENST00000396547 IGHV1-3A0A0C4DH29 117 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 WI2-2373I1.2A0A1W2PRP0 233 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 I3L2K1 104 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 SPRY2O43597 315 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 ADIPOQQ15848 244 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 ZNF562Q6V9R5 426 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 ZNF48Q96MX3 618 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-203ENST00000396547 TMEM14CQ9P0S9 112 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 FAM215AQ9Y5M1 114 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 ATRXP46100 2492 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 BSPH1Q075Z2 132 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 TMEM30BQ3MIR4 351 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 Q6AWC8 147 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 SPTA1P02549 2419 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 LRBAP50851 2863 aa7.7□□□□□ -1.18
TRIM39-203ENST00000396547 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 A0A1B0GWB2 263 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 SIVA1O15304 175 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 CD300EQ496F6 205 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-203ENST00000396547 DPF1Q92782 380 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-203ENST00000396547 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
TRIM39-203ENST00000396547 SVEP1Q4LDE5 3571 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 H3BRN7 92 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 EFNA4P52798 201 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 ZNF493Q6ZR52 646 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 CEND1Q8N111 149 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 IGLL5B9A064 214 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 C16orf97H3BN30 126 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 J3QR89 54 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 K7EIM0 57 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 TGFAP01135 160 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 PLA2G2AP14555 144 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 PRR25Q96S07 402 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 ONECUT1Q9UBC0 465 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 HHLA3Q9XRX5 114 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 COL12A1Q99715 3063 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 AKAP6Q13023 2319 aa7.69□□□□□ -1.18
TRIM39-203ENST00000396547 MBD3L4A6NDZ8 208 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-203ENST00000396547 MBD3L3A6NE82 208 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-203ENST00000396547 MBD3L5A6NJ08 208 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-203ENST00000396547 DPM2O94777 84 aa7.68□□□□□ -1.18
TRIM39-203ENST00000396547 RAB9AP51151 201 aa7.68□□□□□ -1.18
TRIM39-203ENST00000396547 MBD3L2Q8NHZ7 208 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-203ENST00000396547 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
TRIM39-203ENST00000396547 SMIM17P0DL12 118 aa7.68□□□□□ -1.18
TRIM39-203ENST00000396547 CKS1BP61024 79 aa7.68□□□□□ -1.18
TRIM39-203ENST00000396547 Q8NA96 180 aa7.68□□□□□ -1.18
TRIM39-203ENST00000396547 NCBP2LA6PVI3 153 aaKnown RBP7.67□□□□□ -1.18
TRIM39-203ENST00000396547 TIMM23O14925 209 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 HOXB4P17483 251 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-203ENST00000396547 C12orf74Q32Q52 190 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms