RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CDKN1BP46527 198 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 UBE2G2P60604 165 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 TMEM78Q5T7P6 136 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 GOLT1BQ9Y3E0 138 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 TRAV12-2A0A075B6T6 113 aa13.93□□□□□ -0.18
HOXA9-202ENST00000396345 A0A1B0GV50 99 aa13.93□□□□□ -0.18
HOXA9-202ENST00000396345 SUMO1P63165 101 aaKnown RBP13.93□□□□□ -0.18
HOXA9-202ENST00000396345 C5orf17Q8NAS9 161 aa13.93□□□□□ -0.18
HOXA9-202ENST00000396345 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
HOXA9-202ENST00000396345 YTHDF2Q9Y5A9 579 aaKnown RBP13.93□□□□□ -0.18
HOXA9-202ENST00000396345 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 GGTLC3B5MD39 225 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 GNG5P63218 68 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 ZNF705AQ6ZN79 300 aaPredicted RBP13.92□□□□□ -0.18
HOXA9-202ENST00000396345 GOLT1AQ6ZVE7 132 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 C1orf158Q8N1D5 194 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 WWC2-AS2Q96NR7 200 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 X6R8D5 127 aa13.92□□□□□ -0.18
HOXA9-202ENST00000396345 A0A0J9YWU9 116 aa13.91□□□□□ -0.18
HOXA9-202ENST00000396345 FAM74A7A6NL05 159 aa13.91□□□□□ -0.18
HOXA9-202ENST00000396345 ZNF138P52744 262 aa13.91□□□□□ -0.18
HOXA9-202ENST00000396345 TMEM208Q9BTX3 173 aa13.91□□□□□ -0.18
HOXA9-202ENST00000396345 NKX6-2Q9C056 277 aaPredicted RBP13.91□□□□□ -0.18
HOXA9-202ENST00000396345 ZNF492Q9P255 531 aa13.91□□□□□ -0.18
HOXA9-202ENST00000396345 J3KRW8 73 aa13.9□□□□□ -0.18
HOXA9-202ENST00000396345 MIFP14174 115 aa13.9□□□□□ -0.18
HOXA9-202ENST00000396345 KIR3DS1Q14943 382 aa13.9□□□□□ -0.18
HOXA9-202ENST00000396345 ALKAL2Q6UX46 152 aa13.9□□□□□ -0.18
HOXA9-202ENST00000396345 FAM19A4Q96LR4 140 aa13.9□□□□□ -0.18
HOXA9-202ENST00000396345 EPDR1Q9UM22 224 aa13.9□□□□□ -0.18
HOXA9-202ENST00000396345 TRAV1-1A0A0B4J248 108 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 SERTM2A0A1B0GWG4 89 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 IFNA7P01567 189 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 TCRAP04437 139 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 GFI1BQ5VTD9 330 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 Q8TAT8 98 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 NEU1Q99519 415 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 ARL2-SNX15V9GYD0 113 aa13.89□□□□□ -0.19
HOXA9-202ENST00000396345 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 SMIM9A6NGZ8 99 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 K7EQM0 130 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 HBE1P02100 147 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 RBMY1A1P0DJD3 496 aaKnown RBP13.88□□□□□ -0.19
HOXA9-202ENST00000396345 RBMY1CP0DJD4 496 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 CRISP2P16562 243 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 PPT1P50897 306 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 RBMY1FQ15415 496 aaKnown RBP13.88□□□□□ -0.19
HOXA9-202ENST00000396345 CST9LP1Q5W188 147 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 Q8NAQ8 132 aa13.88□□□□□ -0.19
HOXA9-202ENST00000396345 C11orf68Q9H3H3 251 aaKnown RBP13.88□□□□□ -0.19
HOXA9-202ENST00000396345 TRBV7-9A0A0J9YWB2 115 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 DEFB4AO15263 64 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 PAGE4O60829 102 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 GPX1P07203 203 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 NMBP08949 121 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 TMEM256Q8N2U0 113 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 LINC01587Q99440 93 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 C20orf144Q9BQM9 153 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 LENEPQ9Y5L5 61 aa13.87□□□□□ -0.19
HOXA9-202ENST00000396345 TRAV8-1A0A0A6YYK1 113 aa13.86□□□□□ -0.19
HOXA9-202ENST00000396345 KLLNB2CW77 178 aa13.86□□□□□ -0.19
HOXA9-202ENST00000396345 RNASE4P34096 147 aaKnown RBP13.86□□□□□ -0.19
HOXA9-202ENST00000396345 CCL20P78556 96 aa13.86□□□□□ -0.19
HOXA9-202ENST00000396345 ZFAND2AQ8N6M9 145 aa13.86□□□□□ -0.19
HOXA9-202ENST00000396345 CYB561D1Q8N8Q1 229 aa13.86□□□□□ -0.19
HOXA9-202ENST00000396345 ATG101Q9BSB4 218 aa13.86□□□□□ -0.19
HOXA9-202ENST00000396345 DNAH7Q8WXX0 4024 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 TRAV12-3A0A0B4J271 114 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 C7orf71A4D174 169 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 RRN3P1Q2M238 152 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 CCDC28AQ8IWP9 274 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 SGK494Q96LW2 274 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 NIPSNAP3BQ9BS92 247 aa13.85□□□□□ -0.19
HOXA9-202ENST00000396345 ZNF705GA8MUZ8 300 aaPredicted RBP13.84□□□□□ -0.19
HOXA9-202ENST00000396345 H7BYZ3 331 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 PEX7O00628 323 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 ATP5G3P48201 142 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 BLOC1S1P78537 153 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 BTN1A1Q13410 526 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 HIST1H2BAQ96A08 127 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 MANBALQ9NQG1 85 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 GNG13Q9P2W3 67 aa13.84□□□□□ -0.19
HOXA9-202ENST00000396345 F6UZH7 168 aa13.83□□□□□ -0.2
HOXA9-202ENST00000396345 TAS2R60P59551 318 aa13.83□□□□□ -0.2
HOXA9-202ENST00000396345 PRR9Q5T870 116 aa13.83□□□□□ -0.2
HOXA9-202ENST00000396345 TMEM75Q8N9X5 138 aa13.83□□□□□ -0.2
HOXA9-202ENST00000396345 TCEAL7Q9BRU2 100 aa13.83□□□□□ -0.2
HOXA9-202ENST00000396345 PSG8Q9UQ74 426 aa13.83□□□□□ -0.2
HOXA9-202ENST00000396345 LOC102723971A0A1B0GUV8 181 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 TMEM189A5PLL7 270 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 FBLL1A6NHQ2 334 aaKnown RBP13.82□□□□□ -0.2
HOXA9-202ENST00000396345 IGLV2-11P01706 119 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 PRM2P04554 102 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 HTN1P15515 57 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 FLI1Q01543 452 aaPredicted RBP13.82□□□□□ -0.2
HOXA9-202ENST00000396345 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 MUC7Q8TAX7 377 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 LINC00479Q96M42 142 aa13.82□□□□□ -0.2
HOXA9-202ENST00000396345 NDFIP1Q9BT67 221 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms