RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 H7BYZ3 331 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 M0R2Z0 102 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 UPK1BO75841 260 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 CST7O76096 145 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 DAD1P61803 113 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 HIST1H1AQ02539 215 aaPredicted RBP4.32□□□□□ -1.72
PTPN20-208ENST00000395727 FGL1Q08830 312 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 ZNF767PQ75MW2 155 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 LINC00612Q8N6U2 182 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 LRRC20Q8TCA0 184 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 RNASE8Q8TDE3 154 aaKnown RBP4.32□□□□□ -1.72
PTPN20-208ENST00000395727 TMEM263Q8WUH6 116 aaKnown RBP4.32□□□□□ -1.72
PTPN20-208ENST00000395727 RPUSD4Q96CM3 377 aaKnown RBP4.32□□□□□ -1.72
PTPN20-208ENST00000395727 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 TMEM208Q9BTX3 173 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 NMES1Q9C002 83 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 GPN1Q9HCN4 374 aaPredicted RBP4.32□□□□□ -1.72
PTPN20-208ENST00000395727 KCNIP2Q9NS61 270 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 SLC39A9Q9NUM3 307 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 PTTG2Q9NZH5 202 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 TRBV19A0A075B6N1 114 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 FAM24AA6NFZ4 105 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 FAM25EA8MYX2 175 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 E5RGE8 158 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 H3BQ15 152 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 SLC17A3O00476 420 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 BCAP31P51572 246 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 EMP1P54849 157 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 CYCSP99999 105 aaKnown RBP4.31□□□□□ -1.72
PTPN20-208ENST00000395727 BAXQ07812 192 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 ANXA2RQ3ZCQ2 193 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 MIC13Q5XKP0 118 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 TMEM88Q6PEY1 159 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 Q6ZR54 194 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 BAP18Q8IXM2 172 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 OR10J6PQ8NGY7 276 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 ENKURQ8TC29 256 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 MARVELD1Q9BSK0 173 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 SLC25A31Q9H0C2 315 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 PRELID1Q9Y255 219 aa4.31□□□□□ -1.72
PTPN20-208ENST00000395727 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 UBE2L5PA0A1B0GUS4 154 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 A0A1B0GVY2 172 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 CBY3A6NI87 242 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 RLN2P04090 185 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 ATP5G1P05496 136 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 NMBP08949 121 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 HIST1H1EP10412 219 aaKnown RBP4.3□□□□□ -1.72
PTPN20-208ENST00000395727 LEPP41159 167 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 ATP5G3P48201 142 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 S100A10P60903 97 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 RHOBP62745 196 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 GFI1BQ5VTD9 330 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 C18orf15Q96N68 181 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 PYGO2Q9BRQ0 406 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 NPCDR1Q9BY65 106 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 MRPL32Q9BYC8 188 aaKnown RBP4.3□□□□□ -1.72
PTPN20-208ENST00000395727 PPP1R14DQ9NXH3 145 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 ZNF586Q9NXT0 402 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 TIMM8BQ9Y5J9 83 aaPredicted RBP4.3□□□□□ -1.72
PTPN20-208ENST00000395727 TNFRSF18Q9Y5U5 241 aa4.3□□□□□ -1.72
PTPN20-208ENST00000395727 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 BIRC6Q9NR09 4857 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 TRAV12-2A0A075B6T6 113 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
PTPN20-208ENST00000395727 KLLNB2CW77 178 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 PRAC2D3DTV9 90 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 INMT-MINDY4F8WBC2 141 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 H3BNG1 76 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 RTL8CO15255 209 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 NDUFB4O95168 129 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 SLC25A5P05141 298 aaKnown RBP4.29□□□□□ -1.72
PTPN20-208ENST00000395727 PET100P0DJ07 73 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 CRISP2P16562 243 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 AZU1P20160 251 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 FGF7P21781 194 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 IFITM3Q01628 133 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 DAZ2Q13117 558 aaKnown RBP4.29□□□□□ -1.72
PTPN20-208ENST00000395727 DGAT2L7PQ6IED9 249 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 C9orf47Q6ZRZ4 202 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 LYPD1Q8N2G4 141 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 OR5C1Q8NGR4 320 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 FAM167A-AS1Q96KT0 104 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 FAM19A4Q96LR4 140 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 LINC00477Q96M19 166 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 LINC01587Q99440 93 aa4.29□□□□□ -1.72
PTPN20-208ENST00000395727 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
PTPN20-208ENST00000395727 WDR61Q9GZS3 305 aaKnown RBP4.29□□□□□ -1.72
PTPN20-208ENST00000395727 TRAV5A0A0B4J249 113 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 C17orf112F2Z3M2 114 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 H2BFSP57053 126 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 DEFA1P59665 94 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 DEFA3P59666 94 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
PTPN20-208ENST00000395727 UBE2DNLQ8IWF7 75 aa4.28□□□□□ -1.72
PTPN20-208ENST00000395727 ARL6IP6Q8N6S5 226 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms