RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TSKUQ8WUA8 353 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 RPP21Q9H633 154 aaKnown RBP14.64□□□□□ -0.07
LMNB1-202ENST00000395354 SMPXQ9UHP9 88 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 TRAV8-2A0A0B4J237 113 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 C5orf52A6NGY3 159 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 LGALS9O00182 355 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 NSUN5P1Q3KNT7 163 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 REC114Q7Z4M0 266 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 NDUFA11Q86Y39 141 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 IGKV2-40A0A087WW87 121 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-202ENST00000395354 IZUMO1RA6ND01 250 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 ADARB2-AS1A8MUL3 147 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 A8MWL6 223 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BKO60814 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 IGKV2D-40P01614 121 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BJP06899 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BOP23527 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BBP33778 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BDP58876 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BCP62807 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST2H2BEQ16778 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-202ENST00000395354 SHISA2Q6UWI4 295 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 LINC00322Q6ZN03 302 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-202ENST00000395354 C4orf3Q8WVX3 66 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 FRZBQ92765 325 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BHQ93079 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BNQ99877 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 HIST1H2BMQ99879 126 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 RHPN1-AS1Q9BWJ2 59 aa14.63□□□□□ -0.07
LMNB1-202ENST00000395354 FAM231BA6NCW3 169 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 TRGC1P0CF51 173 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 HLA-DMBP28068 263 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 KRTAP21-3Q3LHN1 58 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 TM4SF20Q53R12 229 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 IGFL4Q6B9Z1 124 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 ZC2HC1AQ96GY0 325 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 GFRA4Q9GZZ7 299 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 NAT8BQ9UHF3 227 aa14.62□□□□□ -0.07
LMNB1-202ENST00000395354 A8MWP6 167 aa14.61□□□□□ -0.07
LMNB1-202ENST00000395354 SAMD13Q5VXD3 122 aa14.61□□□□□ -0.07
LMNB1-202ENST00000395354 C16orf92Q96LL3 132 aa14.61□□□□□ -0.07
LMNB1-202ENST00000395354 SAV1Q9H4B6 383 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-202ENST00000395354 TRAPPC1Q9Y5R8 145 aa14.61□□□□□ -0.07
LMNB1-202ENST00000395354 ZNF705FA8MVS1 300 aaPredicted RBP14.6□□□□□ -0.07
LMNB1-202ENST00000395354 CT45A10P0DMU9 189 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 SNRPEP62304 92 aaKnown RBP14.6□□□□□ -0.07
LMNB1-202ENST00000395354 WDR73Q6P4I2 378 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 RASL11AQ6T310 242 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 PRR25Q96S07 402 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 GNB1LQ9BYB4 327 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 NRN1Q9NPD7 142 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 UBE2CO00762 179 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 SOCS3O14543 225 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 CA1P00915 261 aaPredicted RBP14.6□□□□□ -0.07
LMNB1-202ENST00000395354 DEFB136Q30KP8 78 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 RNF182Q8N6D2 247 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 VGLL1Q99990 258 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 NDFIP1Q9BT67 221 aa14.6□□□□□ -0.07
LMNB1-202ENST00000395354 MT-ND6P03923 174 aa14.59□□□□□ -0.07
LMNB1-202ENST00000395354 TCL1AP56279 114 aa14.59□□□□□ -0.07
LMNB1-202ENST00000395354 OR11H1Q8NG94 326 aa14.59□□□□□ -0.07
LMNB1-202ENST00000395354 OR1N2Q8NGR9 330 aa14.59□□□□□ -0.07
LMNB1-202ENST00000395354 PPP1R14DQ9NXH3 145 aa14.59□□□□□ -0.07
LMNB1-202ENST00000395354 WNK1Q9H4A3 2382 aa14.58□□□□□ -0.07
LMNB1-202ENST00000395354 IGHV4OR15-8A0A075B7B6 117 aa14.58□□□□□ -0.08
LMNB1-202ENST00000395354 A0A087WW49 117 aa14.58□□□□□ -0.08
LMNB1-202ENST00000395354 FABP9Q0Z7S8 132 aa14.58□□□□□ -0.08
LMNB1-202ENST00000395354 DPF1Q92782 380 aa14.58□□□□□ -0.08
LMNB1-202ENST00000395354 DUX3Q96PT4 197 aa14.58□□□□□ -0.08
LMNB1-202ENST00000395354 NEU1Q99519 415 aa14.58□□□□□ -0.08
LMNB1-202ENST00000395354 TMEM213A2RRL7 107 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 PRAC2D3DTV9 90 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 NDUFA6P56556 154 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 C9orf47Q6ZRZ4 202 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 ATP5L2Q7Z4Y8 100 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 NUP35Q8NFH5 326 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 RAX2Q96IS3 184 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 C8orf49Q96NF6 230 aa14.57□□□□□ -0.08
LMNB1-202ENST00000395354 HIGD1CA8MV81 97 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 CCL24O00175 119 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 HOXD3P31249 432 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-202ENST00000395354 CRIP1P50238 77 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 FAM162BQ5T6X4 162 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 OR2D3Q8NGH3 330 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 LINC01619G3V211 115 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 OVOL1O14753 267 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 HOXA5P20719 270 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 FOXA3P55318 350 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-202ENST00000395354 KLF5Q13887 457 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-202ENST00000395354 SMUG1Q53HV7 270 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 TCF24Q7RTU0 167 aa14.56□□□□□ -0.08
LMNB1-202ENST00000395354 ZNF138P52744 262 aa14.55□□□□□ -0.08
LMNB1-202ENST00000395354 RPL11P62913 178 aaKnown RBP14.55□□□□□ -0.08
LMNB1-202ENST00000395354 TMEM78Q5T7P6 136 aa14.55□□□□□ -0.08
LMNB1-202ENST00000395354 RBPMS2Q6ZRY4 209 aaKnown RBP14.55□□□□□ -0.08
LMNB1-202ENST00000395354 LENEPQ9Y5L5 61 aa14.55□□□□□ -0.08
LMNB1-202ENST00000395354 HLA-DQA1P01909 254 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 CBLN1P23435 193 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 SYNJ2BPP57105 145 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms