RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 GFI1BQ5VTD9 330 aa14.36□□□□□ -0.11
SNCA-203ENST00000394986 Q8TAT8 98 aa14.36□□□□□ -0.11
SNCA-203ENST00000394986 MAP1LC3BQ9GZQ8 125 aa14.36□□□□□ -0.11
SNCA-203ENST00000394986 TMEM167BQ9NRX6 74 aa14.36□□□□□ -0.11
SNCA-203ENST00000394986 DIRC3C9JPN6 131 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 LEPP41159 167 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 PMS2P11Q13670 270 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 C9orf47Q6ZRZ4 202 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 CMTM2Q8TAZ6 248 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 FAM213BQ8TBF2 198 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 ODF3Q96PU9 254 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 NEU1Q99519 415 aa14.35□□□□□ -0.11
SNCA-203ENST00000394986 C3orf84H3BNL1 204 aa14.34□□□□□ -0.11
SNCA-203ENST00000394986 TSPOP30536 169 aa14.34□□□□□ -0.11
SNCA-203ENST00000394986 NKX2-5P52952 324 aaPredicted RBP14.34□□□□□ -0.11
SNCA-203ENST00000394986 TMEM78Q5T7P6 136 aa14.34□□□□□ -0.11
SNCA-203ENST00000394986 LINC00477Q96M19 166 aa14.34□□□□□ -0.11
SNCA-203ENST00000394986 ZNF705GA8MUZ8 300 aaPredicted RBP14.33□□□□□ -0.11
SNCA-203ENST00000394986 GGTLC3B5MD39 225 aa14.33□□□□□ -0.11
SNCA-203ENST00000394986 SLC25A5P05141 298 aaKnown RBP14.33□□□□□ -0.11
SNCA-203ENST00000394986 UBE2G2P60604 165 aa14.33□□□□□ -0.11
SNCA-203ENST00000394986 FAM74A1Q5RGS3 127 aa14.33□□□□□ -0.11
SNCA-203ENST00000394986 CASC10Q5T4H9 136 aa14.33□□□□□ -0.11
SNCA-203ENST00000394986 RXFP4Q8TDU9 374 aa14.33□□□□□ -0.11
SNCA-203ENST00000394986 FAM19A4Q96LR4 140 aa14.33□□□□□ -0.11
SNCA-203ENST00000394986 A0A1B0GV50 99 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 UMAD1C9J7I0 102 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 HBE1P02100 147 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 EMP1P54849 157 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 NANOS2P60321 138 aaKnown RBP14.32□□□□□ -0.12
SNCA-203ENST00000394986 GOLT1AQ6ZVE7 132 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 ZNF492Q9P255 531 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 CELA1Q9UNI1 258 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 YTHDF2Q9Y5A9 579 aaKnown RBP14.32□□□□□ -0.12
SNCA-203ENST00000394986 RBAKDNA6NC62 111 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 SUMO1P63165 101 aaKnown RBP14.32□□□□□ -0.12
SNCA-203ENST00000394986 BTN1A1Q13410 526 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 RRN3P1Q2M238 152 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 PRR9Q5T870 116 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 SLC51BQ86UW2 128 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 LINC01587Q99440 93 aa14.32□□□□□ -0.12
SNCA-203ENST00000394986 CSMD3Q7Z407 3707 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 TRAV12-3A0A0B4J271 114 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 LOC102723971A0A1B0GUV8 181 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 SMIM9A6NGZ8 99 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 HTN1P15515 57 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 ZNF138P52744 262 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 C11orf45Q8TAV5 145 aa14.31□□□□□ -0.12
SNCA-203ENST00000394986 TRAV8-1A0A0A6YYK1 113 aa14.3□□□□□ -0.12
SNCA-203ENST00000394986 CXorf65A6NEN9 183 aa14.3□□□□□ -0.12
SNCA-203ENST00000394986 AZU1P20160 251 aa14.3□□□□□ -0.12
SNCA-203ENST00000394986 ZFAND2AQ8N6M9 145 aa14.3□□□□□ -0.12
SNCA-203ENST00000394986 C5orf17Q8NAS9 161 aa14.3□□□□□ -0.12
SNCA-203ENST00000394986 SFT2D1Q8WV19 159 aa14.3□□□□□ -0.12
SNCA-203ENST00000394986 A0A1W2PRE2 83 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 KLLNB2CW77 178 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 CRISP2P16562 243 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 RNASE4P34096 147 aaKnown RBP14.29□□□□□ -0.12
SNCA-203ENST00000394986 ZNF767PQ75MW2 155 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 TMEM256Q8N2U0 113 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 MBD3L1Q8WWY6 194 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 SGK494Q96LW2 274 aa14.29□□□□□ -0.12
SNCA-203ENST00000394986 STARD9Q9P2P6 4700 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 C7orf71A4D174 169 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 FAM74A7A6NL05 159 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 TCRAP04437 139 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 GPX1P07203 203 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 DPPA3Q6W0C5 159 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 Q6ZQT7 251 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 BOLA1Q9Y3E2 137 aa14.28□□□□□ -0.12
SNCA-203ENST00000394986 H7BYZ3 331 aa14.27□□□□□ -0.12
SNCA-203ENST00000394986 TAS2R60P59551 318 aa14.27□□□□□ -0.12
SNCA-203ENST00000394986 C20orf144Q9BQM9 153 aa14.27□□□□□ -0.12
SNCA-203ENST00000394986 EPDR1Q9UM22 224 aa14.27□□□□□ -0.12
SNCA-203ENST00000394986 H2AFB1P0C5Y9 115 aa14.26□□□□□ -0.13
SNCA-203ENST00000394986 EIF5AL1Q6IS14 154 aaKnown RBP14.26□□□□□ -0.13
SNCA-203ENST00000394986 ARL6IP6Q8N6S5 226 aa14.26□□□□□ -0.13
SNCA-203ENST00000394986 NIPSNAP3BQ9BS92 247 aa14.26□□□□□ -0.13
SNCA-203ENST00000394986 TMEM189A5PLL7 270 aa14.25□□□□□ -0.13
SNCA-203ENST00000394986 ZNF324O75467 553 aaPredicted RBP14.25□□□□□ -0.13
SNCA-203ENST00000394986 IFNA7P01567 189 aa14.25□□□□□ -0.13
SNCA-203ENST00000394986 PLAC8L1A1L4L8 177 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 SULT1A2P50226 295 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 FAM222AQ5U5X8 452 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 Q6ZTC4 211 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 TVP23CQ96ET8 276 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 TRBV7-9A0A0J9YWB2 115 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 F6UZH7 168 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 PAGE4O60829 102 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 NMBP08949 121 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 ATP5G3P48201 142 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 RAB5CP51148 216 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 C12orf74Q32Q52 190 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 CYB561D1Q8N8Q1 229 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 PHLDA1Q8WV24 401 aaPredicted RBP14.24□□□□□ -0.13
SNCA-203ENST00000394986 LINC00479Q96M42 142 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 ATG101Q9BSB4 218 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 DKK2Q9UBU2 259 aa14.24□□□□□ -0.13
SNCA-203ENST00000394986 TRAV34A0A0B4J273 112 aa14.23□□□□□ -0.13
SNCA-203ENST00000394986 IGLV2-11P01706 119 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms