RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ODF3Q96PU9 254 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 PFDN5Q99471 154 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 WDR61Q9GZS3 305 aaKnown RBP6.17□□□□□ -1.42
ATG4A-205ENST00000394892 TIMM8BQ9Y5J9 83 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-205ENST00000394892 PRAF2O60831 178 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 MPDU1O75352 247 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 MPC2O95563 127 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 BTN1A1Q13410 526 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 ZNF493Q6ZR52 646 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 Q6ZTI0 123 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 BLNKQ8WV28 456 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 MRPL53Q96EL3 112 aaKnown RBP6.16□□□□□ -1.42
ATG4A-205ENST00000394892 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 C20orf144Q9BQM9 153 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 PPP1R14DQ9NXH3 145 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 TP53TG3Q9ULZ0 132 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 RNF24Q9Y225 148 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 LINC00588Q9Y4M8 146 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
ATG4A-205ENST00000394892 HSPG2P98160 4391 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 ATP5G1P05496 136 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 OR10J4P0C629 311 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 NBEAP1P0C6P0 100 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 CRISP2P16562 243 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 ATP5G3P48201 142 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 PDE6HQ13956 83 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 ICAM4Q14773 271 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 C9orf47Q6ZRZ4 202 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 C15orf53Q8NAA6 179 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 KRTAP1-5Q9BYS1 174 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 SLC25A31Q9H0C2 315 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 GSN-AS1Q9NRJ2 163 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 KLF12Q9Y4X4 402 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 HSPB11Q9Y547 144 aa6.15□□□□□ -1.42
ATG4A-205ENST00000394892 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 C7orf71A4D174 169 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 GAGE7O76087 117 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 NUDT3O95989 172 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 RLN2P04090 185 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 GAGE12FP0CL80 117 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 GAGE12GP0CL81 117 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 GAGE12IP0CL82 117 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 RNASE4P34096 147 aaKnown RBP6.14□□□□□ -1.43
ATG4A-205ENST00000394892 LEPP41159 167 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 DAZ2Q13117 558 aaKnown RBP6.14□□□□□ -1.43
ATG4A-205ENST00000394892 Q5BKY6 102 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 FAM122CQ6P4D5 195 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 Q8TAT8 98 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 VSIG2Q96IQ7 327 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 LINC00477Q96M19 166 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 ATP5SQ99766 215 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 SMIM3Q9BZL3 60 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 OR51M1Q9H341 326 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 FUT9Q9Y231 359 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 TIMM9Q9Y5J7 89 aa6.14□□□□□ -1.43
ATG4A-205ENST00000394892 APOBP04114 4563 aaKnown RBP6.14□□□□□ -1.43
ATG4A-205ENST00000394892 TRAV26-1A0A087WT03 109 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 A0A0J9YY99 117 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 C16orf90A8MZG2 172 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 CDK2AP2O75956 126 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 SLC25A5P05141 298 aaKnown RBP6.13□□□□□ -1.43
ATG4A-205ENST00000394892 RPL12P30050 165 aaKnown RBP6.13□□□□□ -1.43
ATG4A-205ENST00000394892 SMCPP49901 116 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-205ENST00000394892 FAM3BP58499 235 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-205ENST00000394892 CYCSP99999 105 aaKnown RBP6.13□□□□□ -1.43
ATG4A-205ENST00000394892 ESRGQ1W209 222 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 MAPKAPK5-AS1Q8N8E1 139 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 PYGO2Q9BRQ0 406 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 PAXXQ9BUH6 204 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 PGPEP1Q9NXJ5 209 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 ZNF492Q9P255 531 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 PRELID1Q9Y255 219 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 ALG5Q9Y673 324 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
ATG4A-205ENST00000394892 NBDYA0A0U1RRE5 68 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 SSNA1O43805 119 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 SPINK4O60575 86 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 TNP2Q05952 138 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 OR5I1Q13606 314 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 FFAR4Q5NUL3 377 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 SSX7Q7RTT5 188 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 RXFP4Q8TDU9 374 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 ATG101Q9BSB4 218 aa6.12□□□□□ -1.43
ATG4A-205ENST00000394892 MRPL32Q9BYC8 188 aaKnown RBP6.12□□□□□ -1.43
ATG4A-205ENST00000394892 M6PRP20645 277 aa6.11□□□□□ -1.43
ATG4A-205ENST00000394892 ZNF138P52744 262 aa6.11□□□□□ -1.43
ATG4A-205ENST00000394892 TCL1AP56279 114 aa6.11□□□□□ -1.43
ATG4A-205ENST00000394892 RAB2AP61019 212 aa6.11□□□□□ -1.43
ATG4A-205ENST00000394892 RANP62826 216 aaKnown RBP6.11□□□□□ -1.43
ATG4A-205ENST00000394892 CCDC28AQ8IWP9 274 aa6.11□□□□□ -1.43
ATG4A-205ENST00000394892 EIF4E3Q8N5X7 224 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms