RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 BRD3OSQ6XYD6 125 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 IL17RELQ6ZVW7 336 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 TMSB15BA0A087X1C1 80 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 SOCS3O14543 225 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 AVPP01185 164 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 TFPI2P48307 235 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 PRR9Q5T870 116 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 Q6AWC8 147 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 D6R8Y8 96 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-202ENST00000394888 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 LINC01545Q5VT33 79 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 LINC00527Q9UJ94 153 aa11.76□□□□□ -0.53
CPSF7-202ENST00000394888 DOPEY1Q5JWR5 2465 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 A0A1B0GW15 77 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV7-4-1A0A0J9YVY3 117 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 K7EQM0 130 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 GLMPQ8WWB7 406 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 AGPAT4-IT1Q9H0P7 198 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 A0A096LNT2 108 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 M0QZK8 103 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
CPSF7-202ENST00000394888 IGF1P05019 195 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 CFHR3Q02985 330 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 RIGQ13278 110 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 OR4C46A6NHA9 309 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 CR1P17927 2039 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 SPOCK3Q9BQ16 436 aa11.74□□□□□ -0.53
CPSF7-202ENST00000394888 TRBV7-1A0A0A6YYK4 115 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 LEPROTL1O95214 131 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
CPSF7-202ENST00000394888 SAPCD1Q5SSQ6 148 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
CPSF7-202ENST00000394888 BRI3O95415 125 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 NPYP01303 97 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 ZNF207O43670 478 aaKnown RBP11.73□□□□□ -0.53
CPSF7-202ENST00000394888 SFTPCP11686 197 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
CPSF7-202ENST00000394888 CENPEQ02224 2701 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 IGHV3-49A0A0A0MS15 119 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 CSN3P07498 182 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 LAMTOR2Q9Y2Q5 125 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 A6NDX4 124 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 NPSP0C0P6 89 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 EDN2P20800 178 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 Q6ZVH6 145 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 IGLV2-18A0A075B6J9 118 aa11.72□□□□□ -0.53
CPSF7-202ENST00000394888 TRAV41A0A0B4J266 112 aa11.71□□□□□ -0.53
CPSF7-202ENST00000394888 C20orf202A1L168 122 aa11.71□□□□□ -0.53
CPSF7-202ENST00000394888 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
CPSF7-202ENST00000394888 Q6ZN92 141 aa11.71□□□□□ -0.53
CPSF7-202ENST00000394888 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
CPSF7-202ENST00000394888 KLK15Q9H2R5 256 aa11.71□□□□□ -0.53
CPSF7-202ENST00000394888 OR5AL1P0C617 328 aa11.71□□□□□ -0.54
CPSF7-202ENST00000394888 FGF6P10767 208 aa11.71□□□□□ -0.54
CPSF7-202ENST00000394888 FER1L6-AS1Q8NA97 138 aa11.71□□□□□ -0.54
CPSF7-202ENST00000394888 TPPP3Q9BW30 176 aa11.71□□□□□ -0.54
CPSF7-202ENST00000394888 FXYD7P58549 80 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 EEF1AKMT3Q96AZ1 226 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 CSN1S1P47710 185 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 C2orf91Q6ZV80 131 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 NPFFR1Q9GZQ6 430 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 TMEM191AQ9H0A3 160 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 IGHG2P01859 326 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 G0S2P27469 103 aa11.7□□□□□ -0.54
CPSF7-202ENST00000394888 IGLV1-40P01703 118 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 TRGV3P03979 118 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 DEFB1P60022 68 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 GAGE1Q13065 139 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 NRGNQ92686 78 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
CPSF7-202ENST00000394888 DLEU1O43261 78 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 S100A7AQ86SG5 101 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 AP5S1Q9NUS5 200 aa11.69□□□□□ -0.54
CPSF7-202ENST00000394888 SPTAN1Q13813 2472 aaKnown RBP11.69□□□□□ -0.54
CPSF7-202ENST00000394888 FAM223BA6NKX1 122 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 CT45A10P0DMU9 189 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms