RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 CHODLQ9H9P2 273 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 TRAV40A0A0B4J280 105 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 CGB3P0DN86 165 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 CGB7P0DN87 165 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 GATA4P43694 442 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 RAXQ9Y2V3 346 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 ZFYVE26Q68DK2 2539 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 MBD6Q96DN6 1003 aa10.48□□□□□ -0.73
NFKB1-202ENST00000394820 IGHV3-64A0A075B6Q5 118 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 TMEM249Q2WGJ8 235 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 TMEM158Q8WZ71 300 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 ZNF747Q9BV97 191 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 ESDP10768 282 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 FOXE3Q13461 319 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 SAMD13Q5VXD3 122 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 C16orf92Q96LL3 132 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 PSMB2P49721 201 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 VGLL1Q99990 258 aa10.47□□□□□ -0.73
NFKB1-202ENST00000394820 LY6EQ16553 131 aa10.46□□□□□ -0.73
NFKB1-202ENST00000394820 DEFB125Q8N687 156 aa10.46□□□□□ -0.73
NFKB1-202ENST00000394820 IGKV1D-37A0A075B6S9 117 aa10.46□□□□□ -0.73
NFKB1-202ENST00000394820 ITGB1BP1O14713 200 aa10.46□□□□□ -0.73
NFKB1-202ENST00000394820 EFNA4P52798 201 aa10.46□□□□□ -0.73
NFKB1-202ENST00000394820 MRPL51Q4U2R6 128 aaKnown RBP10.46□□□□□ -0.73
NFKB1-202ENST00000394820 LOXP28300 417 aaPredicted RBP10.46□□□□□ -0.74
NFKB1-202ENST00000394820 BMI1P35226 326 aa10.46□□□□□ -0.74
NFKB1-202ENST00000394820 SH2D6Q7Z4S9 175 aa10.46□□□□□ -0.74
NFKB1-202ENST00000394820 NEU4Q8WWR8 484 aaPredicted RBP10.46□□□□□ -0.74
NFKB1-202ENST00000394820 FAM231DQ6ZW35 169 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 NEGR1Q7Z3B1 354 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 TRGV9Q99603 122 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 H3BMG7 143 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 COX8AP10176 69 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 CEACAM3P40198 252 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 CDKN1BP46527 198 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 ATP5IP56385 69 aaPredicted RBP10.45□□□□□ -0.74
NFKB1-202ENST00000394820 DEFB1P60022 68 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 CD300EQ496F6 205 aaPredicted RBP10.45□□□□□ -0.74
NFKB1-202ENST00000394820 MRPL16Q9NX20 251 aaKnown RBP10.45□□□□□ -0.74
NFKB1-202ENST00000394820 PIEZO1Q92508 2521 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 LTAP01374 205 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 DPM3Q9P2X0 92 aa10.45□□□□□ -0.74
NFKB1-202ENST00000394820 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
NFKB1-202ENST00000394820 CIDEAO60543 219 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 IGLC1P0CG04 106 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 RASL11AQ6T310 242 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 ZNF833PQ6ZTB9 187 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 NUP37Q8NFH4 326 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 APOBEC3AP31941 199 aaPredicted RBP10.44□□□□□ -0.74
NFKB1-202ENST00000394820 ZNF479Q96JC4 524 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 HIVEP3Q5T1R4 2406 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 FCN3O75636 299 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 PRSS2P07478 247 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 ADAMTSL5Q6ZMM2 481 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 OR11H1Q8NG94 326 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 OR11H2Q8NH07 326 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 MS4A6AQ9H2W1 248 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 AGRNO00468 2067 aa10.44□□□□□ -0.74
NFKB1-202ENST00000394820 TRBV19A0A075B6N1 114 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 SEC11AP67812 179 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
NFKB1-202ENST00000394820 SOX21Q9Y651 276 aaPredicted RBP10.43□□□□□ -0.74
NFKB1-202ENST00000394820 DCHS2Q6V1P9 2916 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 NBR2O15453 112 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 HSD52Q0P140 79 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 TEX36Q5VZQ5 186 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 TTC9CQ8N5M4 171 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 TMEM8BA6NDV4 472 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 IGKV1-17P01599 117 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 CR1LQ2VPA4 569 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 ARPC1AQ92747 370 aa10.43□□□□□ -0.74
NFKB1-202ENST00000394820 FN1P02751 2386 aaKnown RBP10.42□□□□□ -0.74
NFKB1-202ENST00000394820 RAI1Q7Z5J4 1906 aaPredicted RBP10.42□□□□□ -0.74
NFKB1-202ENST00000394820 SHISA9B4DS77 424 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 BUB1B-PAK6H3BSN5 160 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 SCGB3A1Q96QR1 104 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 FABP5P3A8MUU1 101 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 IGKCP01834 107 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 EGR2P11161 476 aaPredicted RBP10.42□□□□□ -0.74
NFKB1-202ENST00000394820 GP9P14770 177 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
NFKB1-202ENST00000394820 PTPRBP23467 1997 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 FXYD2P54710 66 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 CHAC1Q9BUX1 264 aa10.42□□□□□ -0.74
NFKB1-202ENST00000394820 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
NFKB1-202ENST00000394820 DLX6P56179 175 aa10.41□□□□□ -0.74
NFKB1-202ENST00000394820 LY6DQ14210 128 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms