RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 ZNF492Q9P255 531 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 EFNA2O43921 213 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 GAFA1Q96PS6 74 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 DEPPQ9NTK1 212 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 TMEM14BQ9NUH8 114 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE12JA6NER3 117 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 SPINK8P0C7L1 97 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 ARMS2P0C7Q2 107 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE1Q13065 139 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE4Q13068 117 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE5Q13069 117 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 SMIM20Q8N5G0 67 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 MALRD1Q5VYJ5 2156 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 SONP18583 2426 aaKnown RBP6.02□□□□□ -1.45
SYNE2-205ENST00000394768 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 PPDPFLQ8WWR9 84 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 SPATA25Q9BR10 227 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 C20orf78Q9BR46 151 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 LINC00527Q9UJ94 153 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 K7ERS5 55 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 FXYD7P58549 80 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
SYNE2-205ENST00000394768 MRAPQ8TCY5 172 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 LYNX1G3V0Z9 82 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 LYNX1P0DP58 116 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 HLA-DMBP28068 263 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 LAIR2Q6ISS4 152 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 GGNQ86UU5 652 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 Q8N8P6 123 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 H0YIZ8 118 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 Q8TCH9 128 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 FOXF2Q12947 444 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 ZCCHC24Q8N2G6 241 aaKnown RBP6.01□□□□□ -1.45
SYNE2-205ENST00000394768 PRDM6Q9NQX0 595 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 ICOSQ9Y6W8 199 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 SDHAF1A6NFY7 115 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 HLA-DRB4P13762 266 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 FAM219BQ5XKK7 198 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 VPREB3Q9UKI3 123 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 LENEPQ9Y5L5 61 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 HLA-DRB4X5D2U9 266 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 CXCL5P42830 114 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 TMEM14CQ9P0S9 112 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 C2orf66Q6UXQ4 117 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 ZNF329Q86UD4 541 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 MDS2Q8NDY4 140 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 C16orf74Q96GX8 76 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 IGF2BP2-AS1Q96M15 143 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 IGFL3Q6UXB1 125 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 KIR2DL5BA0A0G2JN68 375 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 KIR2DL5BA0A0G2JPC4 375 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 CD55P08174 381 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 PAX9P55771 341 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 KIR2DL5AQ8N109 375 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 NDUFC2O95298 119 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 HIST1H2BLQ99880 126 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 HIVEP2P31629 2446 aa6.01□□□□□ -1.45
SYNE2-205ENST00000394768 IFITM1P13164 125 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 DAZ2Q13117 558 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 Q6ZVH6 145 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 RNASE2P10153 161 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 SLC25A29Q8N8R3 303 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 PRSS47A8MTI9 375 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 CR1LQ2VPA4 569 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 HS3ST6Q96QI5 342 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 RNF222A6NCQ9 220 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 SPINK13Q1W4C9 94 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 IGKV1D-43A0A0B4J1Z2 117 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 ATP6V0E1O15342 81 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 SPART-AS1P0CW21 52 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 RPL18AQ02543 176 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 C1orf122Q6ZSJ8 110 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 Q8TAT8 98 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 MRPL53Q96EL3 112 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 SHISA9B4DS77 424 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 BUB3O43684 328 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 MED12LQ86YW9 2145 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 DKK1O94907 266 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 CD177Q8N6Q3 437 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 NDUFA12Q9UI09 145 aa6□□□□□ -1.45
SYNE2-205ENST00000394768 PRRC2AP48634 2157 aaKnown RBP6□□□□□ -1.45
SYNE2-205ENST00000394768 F6UB75 175 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 C8orf86Q6ZUL3 223 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 ZNF837Q96EG3 531 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-205ENST00000394768 PRO1854Q9UHT4 67 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE12BA1L429 117 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 ZNRF2Q8NHG8 242 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 RBAKDNA6NC62 111 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE7O76087 117 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE12FP0CL80 117 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE12GP0CL81 117 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE12IP0CL82 117 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 RNF126Q9BV68 326 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 DSCAMO60469 2012 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 UBE2AP49459 152 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 RSPO3Q9BXY4 272 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-205ENST00000394768 MYO18BQ8IUG5 2567 aa5.99□□□□□ -1.45
SYNE2-205ENST00000394768 GAGE6Q13070 117 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms