RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 Q71RC1 249 aaPredicted RBP14.79□□□□□ -0.04
HOXC6-202ENST00000394331 SBSPONQ8IVN8 264 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 LINC00311Q8N616 119 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 MAPKAPK5-AS1Q8N8E1 139 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 E7EUB6 86 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 PPIFP30405 207 aaKnown RBP14.79□□□□□ -0.04
HOXC6-202ENST00000394331 LYRM7Q5U5X0 104 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 ASCL5Q7RTU5 278 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 HIGD1AQ9Y241 93 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 DSPP15924 2871 aaKnown RBP14.79□□□□□ -0.04
HOXC6-202ENST00000394331 TMEM8BA6NDV4 472 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 PRSS29PA6NIE9 313 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 HOXA3O43365 443 aaPredicted RBP14.79□□□□□ -0.04
HOXC6-202ENST00000394331 NHLRC4P0CG21 123 aaPredicted RBP14.79□□□□□ -0.04
HOXC6-202ENST00000394331 HERV-K104P63124 156 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 TPPP3Q9BW30 176 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 IGHG4P01861 327 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 IL4P05112 153 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 LEPP41159 167 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 GLMPQ8WWB7 406 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 CCL17Q92583 94 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 CARD19Q96LW7 228 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 K7EMI3 77 aa14.78□□□□□ -0.04
HOXC6-202ENST00000394331 H3BTX0 84 aa14.77□□□□□ -0.04
HOXC6-202ENST00000394331 ZNF688P0C7X2 276 aa14.77□□□□□ -0.04
HOXC6-202ENST00000394331 EXOC3-AS1Q8N2X6 119 aa14.77□□□□□ -0.04
HOXC6-202ENST00000394331 FOXC2Q99958 501 aa14.77□□□□□ -0.04
HOXC6-202ENST00000394331 ZNF318Q5VUA4 2279 aa14.77□□□□□ -0.05
HOXC6-202ENST00000394331 RHODO00212 210 aa14.77□□□□□ -0.05
HOXC6-202ENST00000394331 COX8CQ7Z4L0 72 aa14.77□□□□□ -0.05
HOXC6-202ENST00000394331 WFDC3Q8IUB2 231 aa14.77□□□□□ -0.05
HOXC6-202ENST00000394331 FCN3O75636 299 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 RPL32P62910 135 aaKnown RBP14.76□□□□□ -0.05
HOXC6-202ENST00000394331 NCBP2LA6PVI3 153 aaKnown RBP14.76□□□□□ -0.05
HOXC6-202ENST00000394331 UBE2D3P61077 147 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 UBE2D2P62837 147 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 GFRALQ6UXV0 394 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 IGHV3-48P01763 117 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 TCF15Q12870 199 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 NGBQ9NPG2 151 aa14.76□□□□□ -0.05
HOXC6-202ENST00000394331 PLNP26678 52 aa14.75□□□□□ -0.05
HOXC6-202ENST00000394331 TRBV19A0A075B6N1 114 aa14.75□□□□□ -0.05
HOXC6-202ENST00000394331 LYPD2Q6UXB3 125 aa14.75□□□□□ -0.05
HOXC6-202ENST00000394331 C1orf122Q6ZSJ8 110 aa14.75□□□□□ -0.05
HOXC6-202ENST00000394331 RNASE6Q93091 150 aaKnown RBP14.75□□□□□ -0.05
HOXC6-202ENST00000394331 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
HOXC6-202ENST00000394331 GAGE12JA6NER3 117 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 GAGE7O76087 117 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 GAGE12FP0CL80 117 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 GAGE12GP0CL81 117 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 GAGE12IP0CL82 117 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 GAGE4Q13068 117 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 VMA21Q3ZAQ7 101 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 KAAG1Q9UBP8 84 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 DYNLRB1Q9NP97 96 aa14.74□□□□□ -0.05
HOXC6-202ENST00000394331 M0QXV9 152 aa14.73□□□□□ -0.05
HOXC6-202ENST00000394331 Q6Q795 121 aa14.73□□□□□ -0.05
HOXC6-202ENST00000394331 RPEQ96AT9 228 aa14.73□□□□□ -0.05
HOXC6-202ENST00000394331 SMKR1H3BMG3 65 aa14.73□□□□□ -0.05
HOXC6-202ENST00000394331 IGLV2-23P01705 113 aa14.73□□□□□ -0.05
HOXC6-202ENST00000394331 LOXP28300 417 aaPredicted RBP14.73□□□□□ -0.05
HOXC6-202ENST00000394331 SIGLEC15Q6ZMC9 328 aa14.73□□□□□ -0.05
HOXC6-202ENST00000394331 TRAV40A0A0B4J280 105 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 ASIPP42127 132 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 DIAPH2-AS1Q14236 149 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 RNF185Q96GF1 192 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 CTSZQ9UBR2 303 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 TRBV20-1A0A075B6N2 111 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 A0A087WX48 190 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 MYMXA0A1B0GTQ4 84 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 UBE2D1P51668 147 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 DLX6P56179 175 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 TMEM155Q4W5P6 130 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 CNFNQ9BYD5 112 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 TMEM160Q9NX00 188 aa14.72□□□□□ -0.05
HOXC6-202ENST00000394331 MRPL35Q9NZE8 188 aaKnown RBP14.72□□□□□ -0.05
HOXC6-202ENST00000394331 RP1L1Q8IWN7 2480 aaPredicted RBP14.72□□□□□ -0.05
HOXC6-202ENST00000394331 NDUFV3P56181 108 aaKnown RBP14.72□□□□□ -0.05
HOXC6-202ENST00000394331 A0A1W2PPI3 338 aa14.71□□□□□ -0.05
HOXC6-202ENST00000394331 SRSF2Q01130 221 aaKnown RBP14.71□□□□□ -0.05
HOXC6-202ENST00000394331 C10orf55Q5SWW7 151 aa14.71□□□□□ -0.05
HOXC6-202ENST00000394331 RUSC1-AS1Q66K80 236 aa14.71□□□□□ -0.05
HOXC6-202ENST00000394331 Q8NA96 180 aa14.71□□□□□ -0.05
HOXC6-202ENST00000394331 AGRNO00468 2067 aa14.71□□□□□ -0.05
HOXC6-202ENST00000394331 CENPVL3A0A0U1RRI6 287 aa14.71□□□□□ -0.06
HOXC6-202ENST00000394331 IGLC6P0CF74 106 aa14.71□□□□□ -0.06
HOXC6-202ENST00000394331 Q8N8P6 123 aa14.71□□□□□ -0.06
HOXC6-202ENST00000394331 SCNM1Q9BWG6 230 aa14.71□□□□□ -0.06
HOXC6-202ENST00000394331 NBEAQ8NFP9 2946 aa14.7□□□□□ -0.06
HOXC6-202ENST00000394331 FAM90A27PA6NNH2 459 aa14.7□□□□□ -0.06
HOXC6-202ENST00000394331 FABP5P3A8MUU1 101 aa14.7□□□□□ -0.06
HOXC6-202ENST00000394331 SH2D1AO60880 128 aa14.7□□□□□ -0.06
HOXC6-202ENST00000394331 IGHV1-8P0DP01 117 aa14.7□□□□□ -0.06
HOXC6-202ENST00000394331 A8MWV9 139 aa14.69□□□□□ -0.06
HOXC6-202ENST00000394331 TNFRSF6BO95407 300 aa14.69□□□□□ -0.06
HOXC6-202ENST00000394331 PSMB2P49721 201 aa14.69□□□□□ -0.06
HOXC6-202ENST00000394331 SPENQ96T58 3664 aaKnown RBP14.69□□□□□ -0.06
HOXC6-202ENST00000394331 E7EQL1 145 aa14.69□□□□□ -0.06
HOXC6-202ENST00000394331 PLGLAQ15195 96 aa14.69□□□□□ -0.06
HOXC6-202ENST00000394331 PRSS33Q8NF86 280 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms