RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C7orf66A4D0T2 115 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 NDUFB6O95139 128 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 CRISP2P16562 243 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 GCSHP23434 173 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 CAMLGP49069 296 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 MIC13Q5XKP0 118 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 DNAJC4Q9NNZ3 241 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 TP53TG3Q9ULZ0 132 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 FLVCR2Q9UPI3 526 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 LY96Q9Y6Y9 160 aa10.39□□□□□ -0.75
CHMP3-202ENST00000393773 NDUFB4O95168 129 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 FHL2Q14192 279 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 Q6ZQT7 251 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 Q6ZSN1 163 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 NRARPQ7Z6K4 114 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 C8orf49Q96NF6 230 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
CHMP3-202ENST00000393773 NOL3O60936 208 aaKnown RBP10.37□□□□□ -0.75
CHMP3-202ENST00000393773 MPDU1O75352 247 aa10.37□□□□□ -0.75
CHMP3-202ENST00000393773 MBPP02686 304 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-202ENST00000393773 RNASE4P34096 147 aaKnown RBP10.37□□□□□ -0.75
CHMP3-202ENST00000393773 MRPL23Q16540 153 aaKnown RBP10.37□□□□□ -0.75
CHMP3-202ENST00000393773 NEGR1Q7Z3B1 354 aa10.37□□□□□ -0.75
CHMP3-202ENST00000393773 ZFAND2AQ8N6M9 145 aa10.37□□□□□ -0.75
CHMP3-202ENST00000393773 PFDN5Q99471 154 aa10.37□□□□□ -0.75
CHMP3-202ENST00000393773 HHLA3Q9XRX5 114 aa10.37□□□□□ -0.75
CHMP3-202ENST00000393773 WDR83OSQ9Y284 106 aa10.37□□□□□ -0.75
CHMP3-202ENST00000393773 K7EP13 123 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 PRAF2O60831 178 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 BTCP35070 178 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 PDE6HQ13956 83 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 Q6ZRG5 221 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 SRRQ9GZT4 340 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 TMEM14CQ9P0S9 112 aa10.36□□□□□ -0.75
CHMP3-202ENST00000393773 IGHV1OR15-1A0A075B7D0 117 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-202ENST00000393773 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 K7EQD1 137 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 RGS13O14921 159 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-202ENST00000393773 GPX1P07203 203 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 NMBP08949 121 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 SLAQ13239 276 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 C11orf1Q9H5F2 150 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 GSKIPQ9P0R6 139 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 PRELID1Q9Y255 219 aa10.35□□□□□ -0.75
CHMP3-202ENST00000393773 NAP1L6A6NFF2 107 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 PYYP10082 97 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 SRIP30626 198 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 RAB31Q13636 194 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 MITD1Q8WV92 249 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 UQCC1Q9NVA1 299 aa10.34□□□□□ -0.75
CHMP3-202ENST00000393773 UBE2L5PA0A1B0GUS4 154 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 CCSO14618 274 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 CST7O76096 145 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
CHMP3-202ENST00000393773 EVI2AP22794 236 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 RPL29P47914 159 aaKnown RBP10.33□□□□□ -0.76
CHMP3-202ENST00000393773 ZNF415Q09FC8 603 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 ARPC5LQ9BPX5 153 aa10.33□□□□□ -0.76
CHMP3-202ENST00000393773 MRPL32Q9BYC8 188 aaKnown RBP10.33□□□□□ -0.76
CHMP3-202ENST00000393773 LRP1Q07954 4544 aaKnown RBP10.32□□□□□ -0.76
CHMP3-202ENST00000393773 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 E5RGE8 158 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 L7N2F9 121 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 SFTA3P0C7M3 94 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 S100A5P33763 92 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 VAMP2P63027 116 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 BAK1Q16611 211 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 TMEM78Q5T7P6 136 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 IQCF2Q8IXL9 164 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 OR10G4Q8NGN3 311 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-202ENST00000393773 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 UBR4Q5T4S7 5183 aa10.32□□□□□ -0.76
CHMP3-202ENST00000393773 FAT3Q8TDW7 4589 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 TRGV4A0A0C4DH28 118 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 CRYGDP07320 174 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 GYPEP15421 78 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 CAV2P51636 162 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 BAXQ07812 192 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 C10orf126Q8N4M7 172 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 C12orf45Q8N5I9 185 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-202ENST00000393773 Q8TAT8 98 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 CHAC2Q8WUX2 184 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 BLNKQ8WV28 456 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 ZNF492Q9P255 531 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 LSM5Q9Y4Y9 91 aaKnown RBP10.31□□□□□ -0.76
CHMP3-202ENST00000393773 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
CHMP3-202ENST00000393773 FAM24AA6NFZ4 105 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms