RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ID1P41134 155 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 RAB5BP61020 215 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 SAPCD1Q5SSQ6 148 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 LINC00322Q6ZN03 302 aaPredicted RBP6.54□□□□□ -1.36
TDP1-203ENST00000393454 MRPL53Q96EL3 112 aaKnown RBP6.54□□□□□ -1.36
TDP1-203ENST00000393454 C20orf173Q96LM9 149 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 NDFIP1Q9BT67 221 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 TSSC4Q9Y5U2 329 aaPredicted RBP6.54□□□□□ -1.36
TDP1-203ENST00000393454 SOCS3O14543 225 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 SPINK4O60575 86 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 TMEM78Q5T7P6 136 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 WFDC12Q8WWY7 111 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 DLX4Q92988 240 aaPredicted RBP6.54□□□□□ -1.36
TDP1-203ENST00000393454 BTF3L4Q96K17 158 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 PRR25Q96S07 402 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 PYGO2Q9BRQ0 406 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 RBAKDNA6NC62 111 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 ZNF705DP0CH99 300 aaPredicted RBP6.53□□□□□ -1.36
TDP1-203ENST00000393454 ZNF705BP0CI00 300 aaPredicted RBP6.53□□□□□ -1.36
TDP1-203ENST00000393454 OR9G4Q8NGQ1 327 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 RAX2Q96IS3 184 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 MS4A6AQ9H2W1 248 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 RPP21Q9H633 154 aaKnown RBP6.53□□□□□ -1.36
TDP1-203ENST00000393454 FN1P02751 2386 aaKnown RBP6.53□□□□□ -1.36
TDP1-203ENST00000393454 MAST4O15021 2626 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 C19orf71A6NCJ1 209 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 CCL24O00175 119 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 OVOL1O14753 267 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 TRGC2P03986 189 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 OR10J6PQ8NGY7 276 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 GPR61Q9BZJ8 451 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 SRD5A3Q9H8P0 318 aa6.53□□□□□ -1.36
TDP1-203ENST00000393454 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 A8MWL6 223 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 CRIP1P50238 77 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 ZNF138P52744 262 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 PROK1P58294 105 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 DEFB1P60022 68 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 RPL19P84098 196 aaKnown RBP6.52□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H1AQ02539 215 aaPredicted RBP6.52□□□□□ -1.37
TDP1-203ENST00000393454 NSUN5P1Q3KNT7 163 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 SMUG1Q53HV7 270 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 SAMD13Q5VXD3 122 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 OR2D3Q8NGH3 330 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 DYNLRB2Q8TF09 96 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
TDP1-203ENST00000393454 WNK1Q9H4A3 2382 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 TRAV9-1A0A075B6T8 112 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 SH2D1AO60880 128 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 FAM162BQ5T6X4 162 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 ADAMTSL5Q6ZMM2 481 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 NAT8BQ9UHF3 227 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 F8P00451 2351 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 IZUMO1RA6ND01 250 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 F6UB75 175 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 TYMSP04818 313 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 ZNF688P0C7X2 276 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 GZMBP10144 247 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 SNRPD3P62318 126 aaKnown RBP6.51□□□□□ -1.37
TDP1-203ENST00000393454 PSMG4Q5JS54 123 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
TDP1-203ENST00000393454 RBPMS2Q6ZRY4 209 aaKnown RBP6.51□□□□□ -1.37
TDP1-203ENST00000393454 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 FRZBQ92765 325 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 NEU1Q99519 415 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 TRAPPC1Q9Y5R8 145 aa6.51□□□□□ -1.37
TDP1-203ENST00000393454 TMSB15BA0A087X1C1 80 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 TMEM189A5PLL7 270 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 HIGD1CA8MV81 97 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 J3KRW8 73 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 S100A6P06703 90 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 CSN3P07498 182 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 ZNF80P51504 273 aaPredicted RBP6.5□□□□□ -1.37
TDP1-203ENST00000393454 RAB4BP61018 213 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 FABP9Q0Z7S8 132 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 CT83Q5H943 113 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 OR8A1Q8NGG7 326 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 LINC00477Q96M19 166 aa6.5□□□□□ -1.37
TDP1-203ENST00000393454 NPIPB6E9PJ23 425 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 K7EQG2 157 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 FHL3Q13643 280 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 COX8CQ7Z4L0 72 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 PGLYRP4Q96LB8 373 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 ORM1P02763 201 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 CD33P20138 364 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 GTSF1Q8WW33 167 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 TPPP3Q9BW30 176 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 C2CD3Q4AC94 2353 aa6.49□□□□□ -1.37
TDP1-203ENST00000393454 LOC105371267A0A1B0GV96 52 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms