RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 NTF3P20783 257 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 BMI1P35226 326 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 ARL3P36405 182 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 TDRG1Q3Y452 100 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 ANKRD17O75179 2603 aaKnown RBP6.94□□□□□ -1.3
TDP1-202ENST00000393452 ZFHX3Q15911 3703 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 LRRK2Q5S007 2527 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 IGHV3OR16-13A0A075B7E8 117 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 IGHV3-74A0A0B4J1X5 117 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 ZNF207O43670 478 aaKnown RBP6.94□□□□□ -1.3
TDP1-202ENST00000393452 IGLV1-40P01703 118 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 KRTDAPP60985 99 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 Q6ZS46 218 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 C8orf86Q6ZUL3 223 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 RNF182Q8N6D2 247 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 GLMPQ8WWB7 406 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 CHCHD1Q96BP2 118 aaKnown RBP6.94□□□□□ -1.3
TDP1-202ENST00000393452 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
TDP1-202ENST00000393452 CTRLP40313 264 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 RPS20P60866 119 aaKnown RBP6.93□□□□□ -1.3
TDP1-202ENST00000393452 CFHR3Q02985 330 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
TDP1-202ENST00000393452 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 C2orf88Q9BSF0 95 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 KLK15Q9H2R5 256 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 PTPN13Q12923 2485 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 CRYBG3Q68DQ2 2970 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 IGHV3-49A0A0A0MS15 119 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 J3QLI3 93 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 IGLC6P0CF74 106 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 ERCC8Q13216 396 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 CYB5R2Q6BCY4 276 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 BORCS7Q96B45 105 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 CLEC5AQ9NY25 188 aa6.93□□□□□ -1.3
TDP1-202ENST00000393452 FAM181BA6NEQ2 426 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 C2orf70A6NJV1 201 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 FABP5P3A8MUU1 101 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 M0R2Z0 102 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 AGPAT4-IT1Q9H0P7 198 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 CELSR2Q9HCU4 2923 aa6.92□□□□□ -1.3
TDP1-202ENST00000393452 LINC00614P0C842 121 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 EBLN2Q6P2I7 272 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 C9orf47Q6ZRZ4 202 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 CR1P17927 2039 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 TMSB15BA0A087X1C1 80 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 A0A0G2JLM5 398 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 M0QZ24 198 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 SMAD7O15105 426 aaKnown RBP6.91□□□□□ -1.3
TDP1-202ENST00000393452 PF4V1P10720 104 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 LOXL1Q08397 574 aaPredicted RBP6.91□□□□□ -1.3
TDP1-202ENST00000393452 DEFB112Q30KQ8 113 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
TDP1-202ENST00000393452 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 C9orf139Q6ZV77 190 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 IL17RELQ6ZVW7 336 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 U3KQK5 164 aa6.91□□□□□ -1.3
TDP1-202ENST00000393452 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
TDP1-202ENST00000393452 PLA2G2AP14555 144 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 RAB4AP20338 218 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 ZNF138P52744 262 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 GPHB5Q86YW7 130 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 FER1L6-AS1Q8NA97 138 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 OR4X2Q8NGF9 303 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 FBN2P35556 2912 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 PRRC2AP48634 2157 aaKnown RBP6.9□□□□□ -1.3
TDP1-202ENST00000393452 POLQO75417 2590 aa6.9□□□□□ -1.3
TDP1-202ENST00000393452 TENM4Q6N022 2769 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 A1L4Q6 167 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 SOCS3O14543 225 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 TCAPO15273 167 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 CRXO43186 299 aaPredicted RBP6.9□□□□□ -1.31
TDP1-202ENST00000393452 FSHBP01225 129 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 IGHV3-11P01762 117 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 IGHV4-59P01825 116 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 C21orf62-AS1Q17RA5 79 aa6.9□□□□□ -1.31
TDP1-202ENST00000393452 MAP1AP78559 2803 aaPredicted RBP6.9□□□□□ -1.31
TDP1-202ENST00000393452 TGFAP01135 160 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 ORM1P02763 201 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 HIST1H1AQ02539 215 aaPredicted RBP6.89□□□□□ -1.31
TDP1-202ENST00000393452 TMEM78Q5T7P6 136 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 OR5AL1P0C617 328 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 PSMB8P28062 276 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms