RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ABCA4P78363 2273 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 TTTY12Q9BZ98 90 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 OTOGLQ3ZCN5 2332 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 TRGV8A0A0C4DH27 118 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 CRLF1O75462 422 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 IGLV3-1P01715 115 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 PRB4P10163 310 aaPredicted RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 LINC01620Q4KN68 170 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 NUP210Q8TEM1 1887 aaPredicted RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 ATOX1O00244 68 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 IGHG4P01861 327 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 MLANAQ16655 118 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 PAPPA-AS1Q5QFB9 102 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 Q86TA4 180 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 CARD19Q96LW7 228 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 KLK5Q9Y337 293 aaPredicted RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 IGHV3OR15-7A0A075B7D8 119 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV41A0A0B4J266 112 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 TEX49A0A1B0GTD5 131 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 hADV29S1A0JD25 119 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 NTN3O00634 580 aaPredicted RBP6.09□□□□□ -1.43
VTI1A-201ENST00000393077 CLPSP04118 112 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 DLX6P56179 175 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 COPS9Q8WXC6 57 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 EXPH5Q8NEV8 1989 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 DOPEY2Q9Y3R5 2298 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 TINCRA0A1B0GVN0 87 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 F8VRH5 84 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 TRPT1Q86TN4 253 aaKnown RBP6.09□□□□□ -1.43
VTI1A-201ENST00000393077 CADP27708 2225 aa6.09□□□□□ -1.43
VTI1A-201ENST00000393077 FER1L5A0AVI2 2057 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 A0A0U1RQV1 116 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 RBAKDNA6NC62 111 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 CFC1BP0CG36 223 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 CFC1P0CG37 223 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 SYNJ2BPP57105 145 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 CR1LQ2VPA4 569 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 VMA21Q3ZAQ7 101 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 HCP5Q6MZN7 132 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 ZNF441Q8N8Z8 693 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 SRXN1Q9BYN0 137 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 TNCP24821 2201 aa6.09□□□□□ -1.44
VTI1A-201ENST00000393077 CDH23Q9H251 3354 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 TIMM23O14925 209 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 ATP5G1P05496 136 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 MGPP08493 103 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 ZNF883P0CG24 379 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 APELAP0DMC3 54 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 CD59P13987 128 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 MORN5Q5VZ52 161 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 Q6ZPA2 131 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 SLC25A39Q9BZJ4 359 aaPredicted RBP6.08□□□□□ -1.44
VTI1A-201ENST00000393077 PRO0461Q9UI25 63 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 CACNA1BQ00975 2339 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 CACNA1AO00555 2505 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 EFNA2O43921 213 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 RSPO1Q2MKA7 263 aaPredicted RBP6.08□□□□□ -1.44
VTI1A-201ENST00000393077 LEAP2Q969E1 77 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 DYNLRB1Q9NP97 96 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 PIEZO1Q92508 2521 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 DOCK10Q96BY6 2186 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 MED13LQ71F56 2210 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 DNAL4O96015 105 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 MAPKAPK5-AS1Q8N8E1 139 aa6.08□□□□□ -1.44
VTI1A-201ENST00000393077 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 A0A1B0GX51 115 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 ZNF493Q6ZR52 646 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 ZNF826PQ6ZT77 177 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 PHLDA1Q8WV24 401 aaPredicted RBP6.07□□□□□ -1.44
VTI1A-201ENST00000393077 LY6G6EA0A0G2JKS1 128 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 ACYP1P07311 99 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
VTI1A-201ENST00000393077 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 ORMDL2Q53FV1 153 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 CRIP3Q6Q6R5 217 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 DEFB108BQ8NET1 73 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 DCTN5Q9BTE1 182 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 MSRB2Q9Y3D2 182 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 U3KQA8 63 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 F5H697 171 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 SLC25A53Q5H9E4 307 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 CEP295Q9C0D2 2601 aa6.07□□□□□ -1.44
VTI1A-201ENST00000393077 M0R1B8 84 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 RS1O15537 224 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 FOXL2NBQ6ZUU3 175 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 NDUFA11Q86Y39 141 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 J3QLI3 93 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 NDUFC2O95298 119 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 NPC2P61916 151 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 PEAR1Q5VY43 1037 aaPredicted RBP6.06□□□□□ -1.44
VTI1A-201ENST00000393077 FDCSPQ8NFU4 85 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 ITLN1Q8WWA0 313 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 FOXA2Q9Y261 457 aaPredicted RBP6.06□□□□□ -1.44
VTI1A-201ENST00000393077 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 ZNF785A8K8V0 405 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms