RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 C3orf79P0CE67 100 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 MUSTN1Q8IVN3 82 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 TRAV12-1A0A0B4J245 112 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 LY6DQ14210 128 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 C14orf132Q9NPU4 83 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 SCRT1Q9BWW7 348 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 A6NNC1 897 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 TBX6O95947 436 aaPredicted RBP12□□□□□ -0.49
CCDC50-201ENST00000392455 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
CCDC50-201ENST00000392455 LGALS9BQ3B8N2 356 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 LGALS9CQ6DKI2 356 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 TGFBR3LH3BV60 316 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 C20orf78Q9BR46 151 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 COX8AP10176 69 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 LINC01356Q8N9X3 169 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 NDUFA12Q9UI09 145 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 DSCAMO60469 2012 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 MDS2Q8NDY4 140 aa12□□□□□ -0.49
CCDC50-201ENST00000392455 KLF2Q9Y5W3 355 aaPredicted RBP11.99□□□□□ -0.49
CCDC50-201ENST00000392455 SIPA1L1O43166 1804 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 JMJD7-PLA2G4BH0Y9G9 81 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 ZCCHC24Q8N2G6 241 aaKnown RBP11.99□□□□□ -0.49
CCDC50-201ENST00000392455 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 RNASE2P10153 161 aaKnown RBP11.99□□□□□ -0.49
CCDC50-201ENST00000392455 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
CCDC50-201ENST00000392455 MORN5Q5VZ52 161 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 HS3ST6Q96QI5 342 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
CCDC50-201ENST00000392455 PLXNA3P51805 1871 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 NTN3O00634 580 aaPredicted RBP11.99□□□□□ -0.49
CCDC50-201ENST00000392455 SIGLEC9Q9Y336 463 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 PFN2P35080 140 aa11.99□□□□□ -0.49
CCDC50-201ENST00000392455 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 IGHV1-8P0DP01 117 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 ATP5EP56381 51 aaPredicted RBP11.98□□□□□ -0.49
CCDC50-201ENST00000392455 PYGO2Q9BRQ0 406 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 IGHV1-3A0A0C4DH29 117 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 DEPPQ9NTK1 212 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 SPRR3Q9UBC9 169 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 CD55P08174 381 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 TMEM256Q8N2U0 113 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
CCDC50-201ENST00000392455 C2orf16Q68DN1 1984 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
CCDC50-201ENST00000392455 PSMB8P28062 276 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 PRB4P10163 310 aaPredicted RBP11.97□□□□□ -0.49
CCDC50-201ENST00000392455 ETDBQ3ZM63 59 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 SRRM5B3KS81 715 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 TRBV6-6A0A0A6YYG2 114 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 A0A0B4J2C4 111 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
CCDC50-201ENST00000392455 SLC25A29Q8N8R3 303 aa11.96□□□□□ -0.49
CCDC50-201ENST00000392455 COLCA2A8K830 154 aa11.96□□□□□ -0.49
CCDC50-201ENST00000392455 A8MWP6 167 aa11.96□□□□□ -0.49
CCDC50-201ENST00000392455 NREPQ16612 68 aa11.96□□□□□ -0.49
CCDC50-201ENST00000392455 WBP1Q96G27 269 aa11.96□□□□□ -0.49
CCDC50-201ENST00000392455 CDKN1BP46527 198 aa11.96□□□□□ -0.5
CCDC50-201ENST00000392455 TMEM105Q8N8V8 129 aa11.96□□□□□ -0.5
CCDC50-201ENST00000392455 TMEM14EPQ6UXP3 125 aa11.96□□□□□ -0.5
CCDC50-201ENST00000392455 Q86TA4 180 aa11.96□□□□□ -0.5
CCDC50-201ENST00000392455 ZNF503Q96F45 646 aa11.96□□□□□ -0.5
CCDC50-201ENST00000392455 IGHV1-18A0A0C4DH31 117 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 TNRC6BQ9UPQ9 1833 aaKnown RBP11.95□□□□□ -0.5
CCDC50-201ENST00000392455 NPYP01303 97 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 ANXA2RQ3ZCQ2 193 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 Q6ZWC4 215 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.95□□□□□ -0.5
CCDC50-201ENST00000392455 BUB1B-PAK6H3BSN5 160 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 RHPN1-AS1Q9BWJ2 59 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 MGAMO43451 1857 aa11.95□□□□□ -0.5
CCDC50-201ENST00000392455 SHANK2-AS3Q9BTD1 123 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 BAALC-AS2P0C853 105 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 C15orf53Q8NAA6 179 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 LYZL4Q96KX0 146 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 TET2Q6N021 2002 aaPredicted RBP11.94□□□□□ -0.5
CCDC50-201ENST00000392455 UBE2AP49459 152 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 ZNF329Q86UD4 541 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 OPRPNQ99935 248 aaPredicted RBP11.94□□□□□ -0.5
CCDC50-201ENST00000392455 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
CCDC50-201ENST00000392455 ARMS2P0C7Q2 107 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 SPACA3Q8IXA5 215 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 SONP18583 2426 aaKnown RBP11.93□□□□□ -0.5
CCDC50-201ENST00000392455 IGHV3-53P01767 116 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 ZSWIM8A7E2V4 1837 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 SHISA3A0PJX4 238 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 YPEL3P61236 119 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms