RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 LRRC37A5PQ49AS3 106 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 Q6ZQT7 251 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 CHAC2Q8WUX2 184 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 SLC25A2Q9BXI2 301 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 AGPAT4-IT1Q9H0P7 198 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 GSN-AS1Q9NRJ2 163 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 TMEM14CQ9P0S9 112 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 HSPG2P98160 4391 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 HIST1H1EP10412 219 aaKnown RBP11.51□□□□□ -0.57
PTPRK-208ENST00000392449 ASAH1Q13510 395 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 MZT2BQ6NZ67 158 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 MIR17HGQ75NE6 70 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 OR5C1Q8NGR4 320 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
PTPRK-208ENST00000392449 PYGO2Q9BRQ0 406 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 TIMM9Q9Y5J7 89 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 C7orf71A4D174 169 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 RNASE4P34096 147 aaKnown RBP11.5□□□□□ -0.57
PTPRK-208ENST00000392449 ICAM4Q14773 271 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 ATP6V1FQ16864 119 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 PRR9Q5T870 116 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 FAM122CQ6P4D5 195 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 C11orf72Q8NBR9 251 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 RXFP4Q8TDU9 374 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 FAM167A-AS1Q96KT0 104 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
PTPRK-208ENST00000392449 KLLNB2CW77 178 aa11.49□□□□□ -0.57
PTPRK-208ENST00000392449 H0YIZ8 118 aa11.49□□□□□ -0.57
PTPRK-208ENST00000392449 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-208ENST00000392449 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
PTPRK-208ENST00000392449 ESRGQ1W209 222 aa11.49□□□□□ -0.57
PTPRK-208ENST00000392449 VGLL1Q99990 258 aa11.49□□□□□ -0.57
PTPRK-208ENST00000392449 Q9H8V8 135 aa11.49□□□□□ -0.57
PTPRK-208ENST00000392449 SMCPP49901 116 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-208ENST00000392449 IFITM3Q01628 133 aa11.48□□□□□ -0.57
PTPRK-208ENST00000392449 DAZ2Q13117 558 aaKnown RBP11.48□□□□□ -0.57
PTPRK-208ENST00000392449 ENKURQ8TC29 256 aa11.48□□□□□ -0.57
PTPRK-208ENST00000392449 TP53TG3Q9ULZ0 132 aa11.48□□□□□ -0.57
PTPRK-208ENST00000392449 KLF12Q9Y4X4 402 aa11.48□□□□□ -0.57
PTPRK-208ENST00000392449 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 C16orf90A8MZG2 172 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 MPDU1O75352 247 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 OR10J4P0C629 311 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 PDE6HQ13956 83 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 VSIG2Q96IQ7 327 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 PRELID1Q9Y255 219 aa11.47□□□□□ -0.57
PTPRK-208ENST00000392449 TRGV2A0A075B6R0 118 aa11.46□□□□□ -0.57
PTPRK-208ENST00000392449 ZFAND2AQ8N6M9 145 aa11.46□□□□□ -0.57
PTPRK-208ENST00000392449 Q8TAT8 98 aa11.46□□□□□ -0.57
PTPRK-208ENST00000392449 PHYHIPLQ96FC7 376 aa11.46□□□□□ -0.57
PTPRK-208ENST00000392449 LINC00477Q96M19 166 aa11.46□□□□□ -0.57
PTPRK-208ENST00000392449 AAMDCQ9H7C9 122 aa11.46□□□□□ -0.57
PTPRK-208ENST00000392449 UPK1BO75841 260 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 GPX1P07203 203 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
PTPRK-208ENST00000392449 ZNF680Q8NEM1 530 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 FXYD5Q96DB9 178 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 ZNF503Q96F45 646 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 FUT9Q9Y231 359 aa11.45□□□□□ -0.58
PTPRK-208ENST00000392449 A0A096LPF7 62 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 E5RGE8 158 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 EIF3GO75821 320 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPRK-208ENST00000392449 IGHV3-53P01767 116 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 NBEAP1P0C6P0 100 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 CRISP2P16562 243 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 H2BFSP57053 126 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 LINC01559Q495D7 138 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 NMES1Q9C002 83 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 WDR61Q9GZS3 305 aaKnown RBP11.44□□□□□ -0.58
PTPRK-208ENST00000392449 SLC25A31Q9H0C2 315 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 OR51M1Q9H341 326 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
PTPRK-208ENST00000392449 TMEM78Q5T7P6 136 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 Q9H3A6 140 aa11.44□□□□□ -0.58
PTPRK-208ENST00000392449 MRPS16Q9Y3D3 137 aaKnown RBP11.44□□□□□ -0.58
PTPRK-208ENST00000392449 H3BNG1 76 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 SPINK4O60575 86 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 TCL1AP56279 114 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 ANXA2RQ3ZCQ2 193 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 LINC00299Q6ZSB3 139 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 UPK3BQ9BT76 320 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
PTPRK-208ENST00000392449 INMT-MINDY4F8WBC2 141 aa11.42□□□□□ -0.58
PTPRK-208ENST00000392449 RGS13O14921 159 aa11.42□□□□□ -0.58
PTPRK-208ENST00000392449 OR7C2O60412 319 aa11.42□□□□□ -0.58
PTPRK-208ENST00000392449 SPATA12Q7Z6I5 190 aa11.42□□□□□ -0.58
PTPRK-208ENST00000392449 PPP1R1CQ8WVI7 109 aa11.42□□□□□ -0.58
PTPRK-208ENST00000392449 RANP62826 216 aaKnown RBP11.41□□□□□ -0.58
PTPRK-208ENST00000392449 MUC21Q5SSG8 566 aa11.41□□□□□ -0.58
PTPRK-208ENST00000392449 MRPL32Q9BYC8 188 aaKnown RBP11.41□□□□□ -0.58
PTPRK-208ENST00000392449 SMIM3Q9BZL3 60 aa11.41□□□□□ -0.58
PTPRK-208ENST00000392449 IGHV1OR15-1A0A075B7D0 117 aa11.4□□□□□ -0.58
PTPRK-208ENST00000392449 ZNF138P52744 262 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms