RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 I3L2K1 104 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 OR10J3Q5JRS4 329 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 LYPD6BQ8NI32 183 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 VPREB3Q9UKI3 123 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 H7C1H1 209 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 SLC25A34Q6PIV7 304 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
SNX9-201ENST00000392185 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 RIPPLY3P57055 190 aa12.96□□□□□ -0.33
SNX9-201ENST00000392185 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.33
SNX9-201ENST00000392185 TMEM170BQ5T4T1 132 aa12.96□□□□□ -0.33
SNX9-201ENST00000392185 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
SNX9-201ENST00000392185 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
SNX9-201ENST00000392185 DYNAPQ8N1N2 210 aa12.96□□□□□ -0.33
SNX9-201ENST00000392185 TEX22C9J3V5 150 aa12.96□□□□□ -0.34
SNX9-201ENST00000392185 RPLP1P05386 114 aaKnown RBP12.96□□□□□ -0.34
SNX9-201ENST00000392185 PRSS2P07478 247 aa12.96□□□□□ -0.34
SNX9-201ENST00000392185 NPBQ8NG41 125 aa12.96□□□□□ -0.34
SNX9-201ENST00000392185 UBE2CO00762 179 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 P0C879 139 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 VGLL1Q99990 258 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 COL5A1P20908 1838 aaPredicted RBP12.95□□□□□ -0.34
SNX9-201ENST00000392185 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 NDUFA4O00483 81 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 PRDM13Q9H4Q3 707 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 CFAP54Q96N23 3096 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 F6UB75 175 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 RNF151Q2KHN1 245 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 C11orf1Q9H5F2 150 aa12.95□□□□□ -0.34
SNX9-201ENST00000392185 TMEM262E9PQX1 116 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 CTSGP08311 255 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 ZNF295-AS1Q8N0V1 137 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 PRR25Q96S07 402 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 OR11H12B2RN74 326 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 GCSHP23434 173 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
SNX9-201ENST00000392185 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 EXPH5Q8NEV8 1989 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 SZT2Q5T011 3432 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 PPP1R17O96001 155 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 PPBPP02775 128 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 C10orf91Q5T1B1 145 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 LINC00574Q9H8X3 128 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 XCL2Q9UBD3 114 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 LINC01548A6NM66 108 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 ZNF843Q8N446 348 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 C5orf56Q8N8D9 126 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 C11orf52Q96A22 123 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
SNX9-201ENST00000392185 GSN-AS1Q9NRJ2 163 aa12.93□□□□□ -0.34
SNX9-201ENST00000392185 TRAV12-2A0A075B6T6 113 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 IGHV3-53P01767 116 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 CTAG1AP78358 180 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 ST20Q9HBF5 79 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 A0A087WWL8 130 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 C1orf194Q5T5A4 169 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 TMEM14CQ9P0S9 112 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 BPTFQ12830 3046 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 LINC01619G3V211 115 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 ATP5LO75964 103 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 V9GYV3 84 aa12.92□□□□□ -0.34
SNX9-201ENST00000392185 LY6G5BQ8NDX9 201 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 MCRIP2Q9BUT9 160 aaKnown RBP12.91□□□□□ -0.34
SNX9-201ENST00000392185 HBDP02042 147 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 RAB37Q96AX2 223 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 ZMAT5Q9UDW3 170 aaKnown RBP12.91□□□□□ -0.34
SNX9-201ENST00000392185 MGAQ8IWI9 3026 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.91□□□□□ -0.34
SNX9-201ENST00000392185 CACNG7P62955 275 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 GTSCR1Q86UQ5 136 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 OR11H2Q8NH07 326 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 TRGV11A0A075B6L2 103 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 KNCNA6PVL3 124 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 ELANEP08246 267 aa12.91□□□□□ -0.34
SNX9-201ENST00000392185 PSMB2P49721 201 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 NXT2Q9NPJ8 142 aaKnown RBP12.9□□□□□ -0.34
SNX9-201ENST00000392185 K7EN84 100 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 AJUBAQ96IF1 538 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 KLK9Q9UKQ9 250 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 NDUFA3O95167 84 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 JOSD1Q15040 202 aaPredicted RBP12.9□□□□□ -0.34
SNX9-201ENST00000392185 C11orf71Q6IPW1 123 aa12.9□□□□□ -0.34
SNX9-201ENST00000392185 ANKRD17O75179 2603 aaKnown RBP12.9□□□□□ -0.35
SNX9-201ENST00000392185 H7C2G1 150 aa12.89□□□□□ -0.35
SNX9-201ENST00000392185 SUMO2P61956 95 aaKnown RBP12.89□□□□□ -0.35
SNX9-201ENST00000392185 FANCD2OSQ96PS1 177 aa12.89□□□□□ -0.35
SNX9-201ENST00000392185 IGHV7-4-1A0A0J9YVY3 117 aa12.89□□□□□ -0.35
SNX9-201ENST00000392185 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
SNX9-201ENST00000392185 TRGV4A0A0C4DH28 118 aa12.89□□□□□ -0.35
SNX9-201ENST00000392185 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
SNX9-201ENST00000392185 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
SNX9-201ENST00000392185 SPRY2O43597 315 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms