RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 IGHG3P01860 377 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 TRAV26-1A0A087WT03 109 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 WFDC2Q14508 124 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 Q71RC1 249 aaPredicted RBP12.95□□□□□ -0.34
SHANK1-204ENST00000391814 FXYD5Q96DB9 178 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
SHANK1-204ENST00000391814 RNF5Q99942 180 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 J3KT08 172 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 VOPP1Q96AW1 172 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 TMEM243Q9BU79 118 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 LTAP01374 205 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 CSRP2Q16527 193 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 C8orf86Q6ZUL3 223 aa12.94□□□□□ -0.34
SHANK1-204ENST00000391814 CFC1BP0CG36 223 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 CFC1P0CG37 223 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 NXPH4O95158 308 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 M0R1W7 72 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 BAALC-AS2P0C853 105 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 WIPF2Q8TF74 440 aaPredicted RBP12.93□□□□□ -0.34
SHANK1-204ENST00000391814 TSC2P49815 1807 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 FOXL2NBQ6ZUU3 175 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 RNASE6Q93091 150 aaKnown RBP12.93□□□□□ -0.34
SHANK1-204ENST00000391814 RHPN1-AS1Q9BWJ2 59 aa12.93□□□□□ -0.34
SHANK1-204ENST00000391814 SDHAF1A6NFY7 115 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 H3BRN7 92 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 DTX1Q86Y01 620 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 PLA2G2EQ9NZK7 142 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 FAM236AA0A1B0GUQ0 79 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 FAM236BA0A1B0GV22 79 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 NDUFC2O95298 119 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 FAM120AOSQ5T036 256 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 BRD3OSQ6XYD6 125 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.92□□□□□ -0.34
SHANK1-204ENST00000391814 CFHR1Q03591 330 aa12.92□□□□□ -0.34
SHANK1-204ENST00000391814 hADV29S1A0JD25 119 aa12.91□□□□□ -0.34
SHANK1-204ENST00000391814 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
SHANK1-204ENST00000391814 TEX36Q5VZQ5 186 aa12.91□□□□□ -0.34
SHANK1-204ENST00000391814 C11orf52Q96A22 123 aa12.91□□□□□ -0.34
SHANK1-204ENST00000391814 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
SHANK1-204ENST00000391814 PRR25Q96S07 402 aa12.91□□□□□ -0.34
SHANK1-204ENST00000391814 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
SHANK1-204ENST00000391814 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
SHANK1-204ENST00000391814 RP1P56715 2156 aa12.91□□□□□ -0.34
SHANK1-204ENST00000391814 THSD7AQ9UPZ6 1657 aa12.9□□□□□ -0.34
SHANK1-204ENST00000391814 SMIM2Q9BVW6 85 aa12.9□□□□□ -0.34
SHANK1-204ENST00000391814 ZSWIM8A7E2V4 1837 aa12.9□□□□□ -0.34
SHANK1-204ENST00000391814 DOCK11Q5JSL3 2073 aa12.9□□□□□ -0.34
SHANK1-204ENST00000391814 Q0VFX4 171 aa12.9□□□□□ -0.34
SHANK1-204ENST00000391814 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 IGHG2P01859 326 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 UNC13CQ8NB66 2214 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
SHANK1-204ENST00000391814 TRBV25-1A0A075B6N4 114 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 IGKV3D-7A0A0C4DH55 119 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 FOXI1Q12951 378 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 TMEM14CQ9P0S9 112 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 LRRK1Q38SD2 2015 aa12.89□□□□□ -0.35
SHANK1-204ENST00000391814 Q8NFD4 153 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 SPINK13Q1W4C9 94 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
SHANK1-204ENST00000391814 ZNF833PQ6ZTB9 187 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 MINOS1Q5TGZ0 78 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 MINOS1-NBL1R4GNA1 71 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.88□□□□□ -0.35
SHANK1-204ENST00000391814 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 ZNF561-AS1K7EIQ3 104 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 FXYD2P54710 66 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 NKAPP1Q8N9T2 125 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 C17orf77Q96MU5 243 aa12.88□□□□□ -0.35
SHANK1-204ENST00000391814 A0A1B0GX51 115 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 ZNF493Q6ZR52 646 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 SBF1O95248 1867 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 NDUFB8O95169 186 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 ACYP1P07311 99 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 WISP1O95388 367 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 POU2AF1Q16633 256 aa12.87□□□□□ -0.35
SHANK1-204ENST00000391814 IL15RAQ13261 267 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 TPSG1Q9NRR2 321 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 A0A0B4J2C4 111 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 GATA1P15976 413 aaPredicted RBP12.86□□□□□ -0.35
SHANK1-204ENST00000391814 CFHR4Q92496 578 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 C17orf58Q2M2W7 97 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 ICOSQ9Y6W8 199 aa12.86□□□□□ -0.35
SHANK1-204ENST00000391814 DUX4L9Q6RFH8 374 aaPredicted RBP12.85□□□□□ -0.35
SHANK1-204ENST00000391814 NBL1P41271 181 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 A0A096LPF7 62 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 LINC01545Q5VT33 79 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 ORMDL1Q9P0S3 153 aa12.85□□□□□ -0.35
SHANK1-204ENST00000391814 PLXNA3P51805 1871 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms