RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CCSMST1Q4G0I0 132 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 PMF1Q6P1K2 205 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLT1AQ6ZVE7 132 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 EXOC8Q8IYI6 725 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 SYS1Q8N2H4 156 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 LRRC25Q8N386 305 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 UBL4BQ8N7F7 174 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 WFDC9Q8NEX5 89 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 OR5A2Q8NGI9 324 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 JOSD2Q8TAC2 188 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 COX7B2Q8TF08 81 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 NRGNQ92686 78 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 NT5C3BQ969T7 300 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TOMM6Q96B49 74 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 SPRR4Q96PI1 79 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CIB3Q96Q77 187 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 WFDC6Q9BQY6 131 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 LXNQ9BS40 222 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 MED10Q9BTT4 135 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM126AQ9H061 195 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RWDD1Q9H446 243 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 FBXO44Q9H4M3 255 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RGCCQ9H4X1 137 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 FAM96AQ9H5X1 160 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 LZTFL1Q9NQ48 299 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TP73-AS1Q9UF72 201 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 ODF2LQ9ULJ1 636 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 PIN4Q9Y237 131 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CYSLTR1Q9Y271 337 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 PTPRFP10586 1907 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 WDR97A6NE52 1622 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 MYH9P35579 1960 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TSC2P49815 1807 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 VIRMAQ69YN4 1812 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CTTNBP2Q8WZ74 1663 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 OBSL1O75147 1896 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 ADCY9O60503 1353 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 LRPPRCP42704 1394 aaKnown RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 PPIP5K1Q6PFW1 1433 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 LRP6O75581 1613 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 PAPPAQ13219 1627 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 TRBV7-4A0A0J9YYF1 115 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 J3QRK9 145 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 LIN7AO14910 233 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 OR2J2O76002 312 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 LYPLA2O95372 231 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CRYZL1O95825 349 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 UBCP0CG48 685 aaKnown RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 IL7P13232 177 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 FABP4P15090 132 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CXCL2P19875 107 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 PMCHP20382 165 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 SRP14P37108 136 aaKnown RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 TNNT3P45378 269 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 RPL5P46777 297 aaKnown RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 DNAJB13P59910 316 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 RAB8AP61006 207 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 ARF6P62330 175 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 POU6F1Q14863 301 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 OR8B8Q15620 311 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 AKR1C8PQ5T2L2 129 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 EIF5AL1Q6IS14 154 aaKnown RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 C3orf33Q6P1S2 294 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 ULK3Q6PHR2 472 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 ATP11AUNQ6ZP68 121 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 AKAP14Q86UN6 197 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 BAGE3Q86Y29 109 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 WFDC13Q8IUB5 93 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 SYCE1Q8N0S2 351 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 PQLC3Q8N755 202 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 Q8N8P6 123 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 OR8J3Q8NGG0 315 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 MRPL30Q8TCC3 161 aaKnown RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 GLYATL2Q8WU03 294 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 SMIM4Q8WVI0 70 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 DNAJB3Q8WWF6 145 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 SMIM12Q96EX1 92 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 DIRAS2Q96HU8 199 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CNBD2Q96M20 576 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 LINC01600Q96MT4 127 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 GPX7Q96SL4 187 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 SIGMAR1Q99720 223 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CIB1Q99828 191 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 VPS25Q9BRG1 176 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 EFCAB11Q9BUY7 163 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 PBDC1Q9BVG4 233 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 MROQ9BYG7 248 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CDC42SE2Q9NRR3 84 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 NINJ2Q9NZG7 142 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CDKN2A-AS1Q9UH64 79 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 LAMTOR3Q9UHA4 124 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 RABL2BQ9UNT1 228 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 AP1M2Q9Y6Q5 423 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 SIPA1L1O43166 1804 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 POLA1P09884 1462 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CDK12Q9NYV4 1490 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 CFAP54Q96N23 3096 aa-0.95□□□□□ -2.56
TRAJ28-201ENST00000390509 MED1Q15648 1581 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 NEURL4Q96JN8 1562 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 MYO5BQ9ULV0 1848 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms