RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SH2D1AO60880 128 aa19.21■□□□□ 0.67
SHOX2-201ENST00000389589 Q0VG73 95 aa19.21■□□□□ 0.67
SHOX2-201ENST00000389589 Q6AWC8 147 aa19.21■□□□□ 0.67
SHOX2-201ENST00000389589 UFC1Q9Y3C8 167 aa19.21■□□□□ 0.67
SHOX2-201ENST00000389589 GRIFINA4D1Z8 144 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 TM4SF20Q53R12 229 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 PACRGQ96M98 296 aaPredicted RBP19.2■□□□□ 0.66
SHOX2-201ENST00000389589 RHPN1-AS1Q9BWJ2 59 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 SMPXQ9UHP9 88 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 LGALS1P09382 135 aaKnown RBP19.2■□□□□ 0.66
SHOX2-201ENST00000389589 GZMBP10144 247 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 CAMPP49913 170 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 ERCC8Q13216 396 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 UBE2E2Q96LR5 201 aa19.2■□□□□ 0.66
SHOX2-201ENST00000389589 CD5LO43866 347 aa19.19■□□□□ 0.66
SHOX2-201ENST00000389589 AMBPP02760 352 aa19.19■□□□□ 0.66
SHOX2-201ENST00000389589 GDF5OSQ5U4N7 250 aa19.19■□□□□ 0.66
SHOX2-201ENST00000389589 CCDC168Q8NDH2 2452 aa19.19■□□□□ 0.66
SHOX2-201ENST00000389589 TMEM189A5PLL7 270 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 TMEM18Q96B42 140 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 NRN1Q9NPD7 142 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 A8MWP6 167 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 SLAQ13239 276 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 OR10J3Q5JRS4 329 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 TMEM78Q5T7P6 136 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 C9orf47Q6ZRZ4 202 aa19.18■□□□□ 0.66
SHOX2-201ENST00000389589 HAX1O00165 279 aa19.17■□□□□ 0.66
SHOX2-201ENST00000389589 KIAA1644Q3SXP7 199 aa19.17■□□□□ 0.66
SHOX2-201ENST00000389589 DUX5Q96PT3 197 aa19.17■□□□□ 0.66
SHOX2-201ENST00000389589 PPP1R14DQ9NXH3 145 aa19.17■□□□□ 0.66
SHOX2-201ENST00000389589 FLNAP21333 2647 aaKnown RBP19.17■□□□□ 0.66
SHOX2-201ENST00000389589 SOCS3O14543 225 aa19.16■□□□□ 0.66
SHOX2-201ENST00000389589 RPS20P60866 119 aaKnown RBP19.16■□□□□ 0.66
SHOX2-201ENST00000389589 SRSF2Q01130 221 aaKnown RBP19.16■□□□□ 0.66
SHOX2-201ENST00000389589 TMEM256Q8N2U0 113 aa19.16■□□□□ 0.66
SHOX2-201ENST00000389589 AGPAT4-IT1Q9H0P7 198 aa19.16■□□□□ 0.66
SHOX2-201ENST00000389589 ZNF138P52744 262 aa19.16■□□□□ 0.66
SHOX2-201ENST00000389589 BAGE3Q86Y29 109 aa19.16■□□□□ 0.66
SHOX2-201ENST00000389589 ZNF469Q96JG9 3925 aaPredicted RBP19.15■□□□□ 0.66
SHOX2-201ENST00000389589 A0A1B0GUT8 65 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 KRTAP1-1Q07627 177 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 A0A1B0GW15 77 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 FABP5P3A8MUU1 101 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 ESDP10768 282 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 SRIP30626 198 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 RPL11P62913 178 aaKnown RBP19.15■□□□□ 0.66
SHOX2-201ENST00000389589 RIGQ13278 110 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 ZNF738Q8NE65 137 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 TP53TG3Q9ULZ0 132 aa19.15■□□□□ 0.66
SHOX2-201ENST00000389589 A0A1B0GUS0 222 aa19.14■□□□□ 0.65
SHOX2-201ENST00000389589 ZNF80P51504 273 aaPredicted RBP19.14■□□□□ 0.65
SHOX2-201ENST00000389589 SAMD13Q5VXD3 122 aa19.14■□□□□ 0.65
SHOX2-201ENST00000389589 TLN2Q9Y4G6 2542 aa19.14■□□□□ 0.65
SHOX2-201ENST00000389589 OVOL1O14753 267 aa19.13■□□□□ 0.65
SHOX2-201ENST00000389589 REC114Q7Z4M0 266 aa19.13■□□□□ 0.65
SHOX2-201ENST00000389589 BORCS7Q96B45 105 aa19.13■□□□□ 0.65
SHOX2-201ENST00000389589 C20orf173Q96LM9 149 aa19.13■□□□□ 0.65
SHOX2-201ENST00000389589 PYY3Q5JQD4 70 aa19.13■□□□□ 0.65
SHOX2-201ENST00000389589 LGALS9O00182 355 aa19.12■□□□□ 0.65
SHOX2-201ENST00000389589 SSBP4Q9BWG4 385 aaPredicted RBP19.12■□□□□ 0.65
SHOX2-201ENST00000389589 YAE1D1Q9NRH1 226 aa19.12■□□□□ 0.65
SHOX2-201ENST00000389589 LENEPQ9Y5L5 61 aa19.12■□□□□ 0.65
SHOX2-201ENST00000389589 UNC79Q9P2D8 2635 aa19.11■□□□□ 0.65
SHOX2-201ENST00000389589 ITPR2Q14571 2701 aa19.11■□□□□ 0.65
SHOX2-201ENST00000389589 SERF1AO75920 110 aa19.11■□□□□ 0.65
SHOX2-201ENST00000389589 KLHDC1Q8N7A1 406 aa19.11■□□□□ 0.65
SHOX2-201ENST00000389589 NIT2Q9NQR4 276 aa19.11■□□□□ 0.65
SHOX2-201ENST00000389589 DNAJC9-AS1A6NH13 148 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 NUPR1O60356 82 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 LINC00477Q96M19 166 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 TMEM213A2RRL7 107 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 ARMS2P0C7Q2 107 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 PAFAH1B2P68402 229 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 OR10J6PQ8NGY7 276 aa19.1■□□□□ 0.65
SHOX2-201ENST00000389589 IGHV4OR15-8A0A075B7B6 117 aa19.09■□□□□ 0.65
SHOX2-201ENST00000389589 A0A087WW49 117 aa19.09■□□□□ 0.65
SHOX2-201ENST00000389589 LINC00310P59036 64 aa19.09■□□□□ 0.65
SHOX2-201ENST00000389589 HIST1H1AQ02539 215 aaPredicted RBP19.09■□□□□ 0.65
SHOX2-201ENST00000389589 GATD1Q8NB37 220 aa19.09■□□□□ 0.65
SHOX2-201ENST00000389589 TMSB15BA0A087X1C1 80 aa19.09■□□□□ 0.65
SHOX2-201ENST00000389589 SCGB2A2Q13296 93 aa19.09■□□□□ 0.65
SHOX2-201ENST00000389589 FAM181BA6NEQ2 426 aa19.08■□□□□ 0.64
SHOX2-201ENST00000389589 KLF5Q13887 457 aaPredicted RBP19.08■□□□□ 0.64
SHOX2-201ENST00000389589 LINC01559Q495D7 138 aa19.08■□□□□ 0.64
SHOX2-201ENST00000389589 DNLZQ5SXM8 178 aa19.08■□□□□ 0.64
SHOX2-201ENST00000389589 ALKBH7Q9BT30 221 aaPredicted RBP19.08■□□□□ 0.64
SHOX2-201ENST00000389589 F2Z2F3 143 aa19.07■□□□□ 0.64
SHOX2-201ENST00000389589 ORM1P02763 201 aa19.07■□□□□ 0.64
SHOX2-201ENST00000389589 ID1P41134 155 aa19.07■□□□□ 0.64
SHOX2-201ENST00000389589 TPPP3Q9BW30 176 aa19.07■□□□□ 0.64
SHOX2-201ENST00000389589 HOXD3P31249 432 aaPredicted RBP19.07■□□□□ 0.64
SHOX2-201ENST00000389589 LYZL1Q6UWQ5 148 aa19.07■□□□□ 0.64
SHOX2-201ENST00000389589 C18orf32Q8TCD1 76 aa19.07■□□□□ 0.64
SHOX2-201ENST00000389589 EDN2P20800 178 aa19.06■□□□□ 0.64
SHOX2-201ENST00000389589 SYNJ2BPP57105 145 aa19.06■□□□□ 0.64
SHOX2-201ENST00000389589 GCN1Q92616 2671 aaKnown RBP19.06■□□□□ 0.64
SHOX2-201ENST00000389589 Q6ZSV7 163 aa19.05■□□□□ 0.64
SHOX2-201ENST00000389589 IGKV3-7A0A075B6H7 116 aa19.05■□□□□ 0.64
SHOX2-201ENST00000389589 CTRLP40313 264 aa19.05■□□□□ 0.64
SHOX2-201ENST00000389589 JOSD1Q15040 202 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms