RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 IGKV3-15P01624 115 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 THBDP07204 575 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 FCER1GP30273 86 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 LEPP41159 167 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 ZNF833PQ6ZTB9 187 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 TMEM8BA6NDV4 472 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 HIST1H4GQ99525 98 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 PLXNB1O43157 2135 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 PRB4P10163 310 aaPredicted RBP11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 MORN3Q6PF18 240 aaPredicted RBP11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 FAM169BQ8N8A8 192 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 FOXC2Q99958 501 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 ANAPC13Q9BS18 74 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 PROCRQ9UNN8 238 aa11.53□□□□□ -0.56
VPS9D1-201ENST00000389386 TRBV7-3A0A075B6L6 115 aa11.52□□□□□ -0.56
VPS9D1-201ENST00000389386 TMSB15BA0A087X1C1 80 aa11.52□□□□□ -0.56
VPS9D1-201ENST00000389386 A0A1W2PPI3 338 aa11.52□□□□□ -0.56
VPS9D1-201ENST00000389386 FAM201AQ5SY85 155 aa11.52□□□□□ -0.56
VPS9D1-201ENST00000389386 MBNL2Q5VZF2 373 aaKnown RBP11.52□□□□□ -0.56
VPS9D1-201ENST00000389386 TMEM158Q8WZ71 300 aa11.52□□□□□ -0.56
VPS9D1-201ENST00000389386 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.57
VPS9D1-201ENST00000389386 UFC1Q9Y3C8 167 aa11.52□□□□□ -0.57
VPS9D1-201ENST00000389386 LHBP01229 141 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 ABCA1O95477 2261 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 C17orf77Q96MU5 243 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 C8orf49Q96NF6 230 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 TMEM160Q9NX00 188 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 M0R1B8 84 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 ATP5LO75964 103 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 ID1P41134 155 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 TWIST1Q15672 202 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 C22orf34Q6ZV56 151 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 MAP1LC3AQ9H492 121 aa11.51□□□□□ -0.57
VPS9D1-201ENST00000389386 TRBV19A0A075B6N1 114 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 PRSS29PA6NIE9 313 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 LINC01559Q495D7 138 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 ZNF474Q6S9Z5 364 aaPredicted RBP11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 FAM215AQ9Y5M1 114 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 CACNA1AO00555 2505 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 ITPR1Q14643 2758 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 ARL3P36405 182 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 LYZP61626 148 aa11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 DLX4Q92988 240 aaPredicted RBP11.5□□□□□ -0.57
VPS9D1-201ENST00000389386 IGLV2-23P01705 113 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 MRPL35Q9NZE8 188 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 RALYQ9UKM9 306 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 HOXA3O43365 443 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 GAS8-AS1O95177 125 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 RBP4P02753 201 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 PPDPFLQ8WWR9 84 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
VPS9D1-201ENST00000389386 LINC01619G3V211 115 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 SH2D1AO60880 128 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 TMEM30BQ3MIR4 351 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 PTH2Q96A98 100 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 K7ENP7 123 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 CITED1Q99966 193 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 TPSG1Q9NRR2 321 aa11.48□□□□□ -0.57
VPS9D1-201ENST00000389386 ACACBO00763 2458 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 FAM27E3Q08E93 113 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 MRGPRG-AS1Q2M3A8 158 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 NGBQ9NPG2 151 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 SLC25A15Q9Y619 301 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 SPRY3O43610 288 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 IGLV1-44P01699 117 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 TMEM133Q9H2Q1 129 aa11.47□□□□□ -0.57
VPS9D1-201ENST00000389386 FAM90A27PA6NNH2 459 aa11.46□□□□□ -0.57
VPS9D1-201ENST00000389386 IL4P05112 153 aa11.46□□□□□ -0.57
VPS9D1-201ENST00000389386 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
VPS9D1-201ENST00000389386 VCX2Q9H322 139 aa11.46□□□□□ -0.57
VPS9D1-201ENST00000389386 LINC01548A6NM66 108 aa11.46□□□□□ -0.58
VPS9D1-201ENST00000389386 M0R3E3 92 aa11.46□□□□□ -0.58
VPS9D1-201ENST00000389386 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.58
VPS9D1-201ENST00000389386 C1orf162Q8NEQ5 155 aaPredicted RBP11.46□□□□□ -0.58
VPS9D1-201ENST00000389386 YAE1D1Q9NRH1 226 aa11.46□□□□□ -0.58
VPS9D1-201ENST00000389386 MBD3L4A6NDZ8 208 aaPredicted RBP11.45□□□□□ -0.58
VPS9D1-201ENST00000389386 MBD3L3A6NE82 208 aaPredicted RBP11.45□□□□□ -0.58
VPS9D1-201ENST00000389386 MBD3L5A6NJ08 208 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms