RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PPP1R14DQ9NXH3 145 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 TEX15Q9BXT5 2789 aa17.74■□□□□ 0.43
VPS16-201ENST00000380443 NAV2Q8IVL1 2488 aa17.74■□□□□ 0.43
VPS16-201ENST00000380443 LOC102724200A0A096LPH7 203 aaPredicted RBP17.74■□□□□ 0.43
VPS16-201ENST00000380443 DEFB112Q30KQ8 113 aa17.74■□□□□ 0.43
VPS16-201ENST00000380443 Q71RC1 249 aaPredicted RBP17.74■□□□□ 0.43
VPS16-201ENST00000380443 C8orf86Q6ZUL3 223 aa17.73■□□□□ 0.43
VPS16-201ENST00000380443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.73■□□□□ 0.432e-6■■■■□ 21
VPS16-201ENST00000380443 FABP5P3A8MUU1 101 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 ZNF705FA8MVS1 300 aaPredicted RBP17.72■□□□□ 0.43
VPS16-201ENST00000380443 FSHBP01225 129 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 HLA-DMBP28068 263 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 OR4X2Q8NGF9 303 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 NRN1Q9NPD7 142 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 ZNF493Q6ZR52 646 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 ASCL2Q99929 193 aa17.72■□□□□ 0.43
VPS16-201ENST00000380443 TRAV8-2A0A0B4J237 113 aa17.71■□□□□ 0.43
VPS16-201ENST00000380443 IGHV3-66A0A0C4DH42 116 aa17.71■□□□□ 0.43
VPS16-201ENST00000380443 IGFL4Q6B9Z1 124 aa17.71■□□□□ 0.43
VPS16-201ENST00000380443 ZNF664Q8N3J9 261 aa17.71■□□□□ 0.43
VPS16-201ENST00000380443 CHCHD1Q96BP2 118 aaKnown RBP17.71■□□□□ 0.43
VPS16-201ENST00000380443 ZNF207O43670 478 aaKnown RBP17.7■□□□□ 0.42
VPS16-201ENST00000380443 HSBP1O75506 76 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 ARMS2P0C7Q2 107 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 IGHV4-31P0DP07 118 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 RAB4AP20338 218 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 NPFFR1Q9GZQ6 430 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 PRSS57Q6UWY2 283 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 C9orf47Q6ZRZ4 202 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 KLK15Q9H2R5 256 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 LENEPQ9Y5L5 61 aa17.7■□□□□ 0.42
VPS16-201ENST00000380443 RNF223E7ERA6 249 aa17.69■□□□□ 0.42
VPS16-201ENST00000380443 IGHV4-59P01825 116 aa17.69■□□□□ 0.42
VPS16-201ENST00000380443 ZNF705DP0CH99 300 aaPredicted RBP17.69■□□□□ 0.42
VPS16-201ENST00000380443 ZNF705BP0CI00 300 aaPredicted RBP17.69■□□□□ 0.42
VPS16-201ENST00000380443 PMCHP20382 165 aa17.69■□□□□ 0.42
VPS16-201ENST00000380443 DDTP30046 118 aa17.69■□□□□ 0.42
VPS16-201ENST00000380443 TMEM78Q5T7P6 136 aa17.69■□□□□ 0.42
VPS16-201ENST00000380443 ZNF138P52744 262 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 Q8TAT8 98 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 C16orf92Q96LL3 132 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 MAST4O15021 2626 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 IGHV3OR16-13A0A075B7E8 117 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 IGHV3-74A0A0B4J1X5 117 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 PRAC2D3DTV9 90 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 K7EMT4 169 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 TRBV12-3P01733 135 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 CTRLP40313 264 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 DEFA6Q01524 100 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 HIST1H1AQ02539 215 aaPredicted RBP17.68■□□□□ 0.42
VPS16-201ENST00000380443 TEX43Q6ZNM6 134 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 Q6ZS46 218 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 NIT1Q86X76 327 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 RNF182Q8N6D2 247 aa17.68■□□□□ 0.42
VPS16-201ENST00000380443 LINC01559Q495D7 138 aa17.67■□□□□ 0.42
VPS16-201ENST00000380443 LYZL1Q6UWQ5 148 aa17.67■□□□□ 0.42
VPS16-201ENST00000380443 PRO1933Q9H354 126 aa17.67■□□□□ 0.42
VPS16-201ENST00000380443 PEF1Q9UBV8 284 aaKnown RBP17.67■□□□□ 0.42
VPS16-201ENST00000380443 IGHV3-49A0A0A0MS15 119 aa17.66■□□□□ 0.42
VPS16-201ENST00000380443 UNQ9165/PRO28630Q6UXU0 137 aa17.66■□□□□ 0.42
VPS16-201ENST00000380443 AGPAT4-IT1Q9H0P7 198 aa17.66■□□□□ 0.42
VPS16-201ENST00000380443 VPREB3Q9UKI3 123 aa17.66■□□□□ 0.42
VPS16-201ENST00000380443 IGLC6P0CF74 106 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 PSMB8P28062 276 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 ZNF80P51504 273 aaPredicted RBP17.65■□□□□ 0.42
VPS16-201ENST00000380443 ERCC8Q13216 396 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 FAM106AQ4KMX7 169 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 Q5PR19 223 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 SAMD13Q5VXD3 122 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 Q6YL49 198 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 IGHV3-11P01762 117 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 RNASEKQ6P5S7 137 aaKnown RBP17.65■□□□□ 0.42
VPS16-201ENST00000380443 FER1L6-AS1Q8NA97 138 aa17.65■□□□□ 0.42
VPS16-201ENST00000380443 IGHV7-4-1A0A0J9YVY3 117 aa17.64■□□□□ 0.41
VPS16-201ENST00000380443 OVOL1O14753 267 aa17.64■□□□□ 0.41
VPS16-201ENST00000380443 GPHB5Q86YW7 130 aa17.64■□□□□ 0.41
VPS16-201ENST00000380443 DAZ1Q9NQZ3 744 aaKnown RBP17.64■□□□□ 0.41
VPS16-201ENST00000380443 CCDC168Q8NDH2 2452 aa17.64■□□□□ 0.41
VPS16-201ENST00000380443 M0R2Z0 102 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 SMAD7O15105 426 aaKnown RBP17.63■□□□□ 0.41
VPS16-201ENST00000380443 NTF3P20783 257 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 KRTDAPP60985 99 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 LINC00477Q96M19 166 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 TPPP3Q9BW30 176 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 OTOGQ6ZRI0 2925 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 KIR2DL5BA0A0G2JN68 375 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 KIR2DL5BA0A0G2JPC4 375 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 ORM1P02763 201 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 PRB4P10163 310 aaPredicted RBP17.63■□□□□ 0.41
VPS16-201ENST00000380443 REC114Q7Z4M0 266 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 KIR2DL5AQ8N109 375 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 CNFNQ9BYD5 112 aa17.63■□□□□ 0.41
VPS16-201ENST00000380443 AKAP9Q99996 3911 aa17.62■□□□□ 0.41
VPS16-201ENST00000380443 TMSB15BA0A087X1C1 80 aa17.62■□□□□ 0.41
VPS16-201ENST00000380443 OR5AL1P0C617 328 aa17.62■□□□□ 0.41
VPS16-201ENST00000380443 LINC00614P0C842 121 aa17.62■□□□□ 0.41
VPS16-201ENST00000380443 FAM19A2Q8N3H0 131 aa17.62■□□□□ 0.41
VPS16-201ENST00000380443 SOCS3O14543 225 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 IL17RELQ6ZVW7 336 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 TEX29Q8N6K0 151 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms