RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 C20orf85Q9H1P6 137 aa15.84■□□□□ 0.13
U2AF1-202ENST00000380276 SLC39A9Q9NUM3 307 aa15.84■□□□□ 0.13
U2AF1-202ENST00000380276 TRBV19A0A075B6N1 114 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 C5orf51A6NDU8 294 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 RGS13O14921 159 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 ZNF253O75346 499 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 GPX1P07203 203 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 Q6ZRN7 208 aaPredicted RBP15.83■□□□□ 0.12
U2AF1-202ENST00000380276 LINC00477Q96M19 166 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 MRPL16Q9NX20 251 aaKnown RBP15.83■□□□□ 0.12
U2AF1-202ENST00000380276 PGPEP1Q9NXJ5 209 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 WDR83OSQ9Y284 106 aa15.83■□□□□ 0.12
U2AF1-202ENST00000380276 MPDU1O75352 247 aa15.82■□□□□ 0.12
U2AF1-202ENST00000380276 ANXA2RQ3ZCQ2 193 aa15.82■□□□□ 0.12
U2AF1-202ENST00000380276 C18orf15Q96N68 181 aa15.82■□□□□ 0.12
U2AF1-202ENST00000380276 ARPC5LQ9BPX5 153 aa15.82■□□□□ 0.12
U2AF1-202ENST00000380276 PRELID1Q9Y255 219 aa15.82■□□□□ 0.12
U2AF1-202ENST00000380276 TNFRSF18Q9Y5U5 241 aa15.82■□□□□ 0.12
U2AF1-202ENST00000380276 KLLNB2CW77 178 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 SPINK4O60575 86 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 ZNF324O75467 553 aaPredicted RBP15.81■□□□□ 0.12
U2AF1-202ENST00000380276 PYYP10082 97 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 PVALBP20472 110 aaPredicted RBP15.81■□□□□ 0.12
U2AF1-202ENST00000380276 TCL1AP56279 114 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 S100A10P60903 97 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 EXOC3-AS1Q8N2X6 119 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 AGPAT4-IT1Q9H0P7 198 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 AAMDCQ9H7C9 122 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 TP53TG3Q9ULZ0 132 aa15.81■□□□□ 0.12
U2AF1-202ENST00000380276 INAFM2P0DMQ5 153 aa15.8■□□□□ 0.12
U2AF1-202ENST00000380276 HIST1H1EP10412 219 aaKnown RBP15.8■□□□□ 0.12
U2AF1-202ENST00000380276 FGF7P21781 194 aa15.8■□□□□ 0.12
U2AF1-202ENST00000380276 RPL29P47914 159 aaKnown RBP15.8■□□□□ 0.12
U2AF1-202ENST00000380276 ST6GAL2Q96JF0 529 aa15.8■□□□□ 0.12
U2AF1-202ENST00000380276 LINC00467Q9BRT7 94 aa15.8■□□□□ 0.12
U2AF1-202ENST00000380276 IGKV2-40A0A087WW87 121 aaPredicted RBP15.79■□□□□ 0.12
U2AF1-202ENST00000380276 IGKV2D-40P01614 121 aaPredicted RBP15.79■□□□□ 0.12
U2AF1-202ENST00000380276 CNPY1Q3B7I2 92 aa15.79■□□□□ 0.12
U2AF1-202ENST00000380276 TMEM78Q5T7P6 136 aa15.79■□□□□ 0.12
U2AF1-202ENST00000380276 FAM122CQ6P4D5 195 aa15.79■□□□□ 0.12
U2AF1-202ENST00000380276 C8orf49Q96NF6 230 aa15.79■□□□□ 0.12
U2AF1-202ENST00000380276 PRO0255Q9UI72 69 aa15.79■□□□□ 0.12
U2AF1-202ENST00000380276 NDUFB4O95168 129 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 IFNA5P01569 189 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 IL7P13232 177 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 ICAM4Q14773 271 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 NFE4Q86UQ8 179 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 FAM19A4Q96LR4 140 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 SDHCQ99643 169 aaPredicted RBP15.78■□□□□ 0.12
U2AF1-202ENST00000380276 TMEM14CQ9P0S9 112 aa15.78■□□□□ 0.12
U2AF1-202ENST00000380276 DNAH10OSP0CZ25 163 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 S100A11P31949 105 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 SULT1A1P50225 295 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 HBG1P69891 147 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 HBG2P69892 147 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 IBA57Q5T440 356 aaKnown RBP15.77■□□□□ 0.12
U2AF1-202ENST00000380276 CDPF1Q6NVV7 123 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 STX12Q86Y82 276 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 SEC22CQ9BRL7 303 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 HHLA3Q9XRX5 114 aa15.77■□□□□ 0.12
U2AF1-202ENST00000380276 TRAV6A0A075B6T7 132 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 IGHV1OR15-1A0A075B7D0 117 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 TRAV9-2A0A087WT02 112 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 IGSF23A1L1A6 192 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 PRAF2O60831 178 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 CRYBA4P53673 196 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 SLAQ13239 276 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 PDE6HQ13956 83 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 MRPL23Q16540 153 aaKnown RBP15.76■□□□□ 0.11
U2AF1-202ENST00000380276 VWC2Q2TAL6 325 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 PRR9Q5T870 116 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 LYPD5Q6UWN5 251 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 LYPD1Q8N2G4 141 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 FRZBQ92765 325 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 C2orf50Q96LR7 162 aa15.76■□□□□ 0.11
U2AF1-202ENST00000380276 GPN1Q9HCN4 374 aaPredicted RBP15.76■□□□□ 0.11
U2AF1-202ENST00000380276 TRGV4A0A0C4DH28 118 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 CRISP2P16562 243 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 ZNF415Q09FC8 603 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 Q6ZQT7 251 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 C9orf47Q6ZRZ4 202 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 VGLL1Q99990 258 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 LYRM2Q9NU23 88 aaPredicted RBP15.75■□□□□ 0.11
U2AF1-202ENST00000380276 LY96Q9Y6Y9 160 aa15.75■□□□□ 0.11
U2AF1-202ENST00000380276 E5RGE8 158 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 XGP55808 180 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 GCSAMLQ5JQS6 135 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 Q5VSD8 79 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 NEGR1Q7Z3B1 354 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 TMEM252Q8N6L7 170 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 ZFAND2AQ8N6M9 145 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 RBM38Q9H0Z9 239 aaKnown RBP15.74■□□□□ 0.11
U2AF1-202ENST00000380276 C11orf1Q9H5F2 150 aa15.74■□□□□ 0.11
U2AF1-202ENST00000380276 A0A087WTM6 91 aa15.73■□□□□ 0.11
U2AF1-202ENST00000380276 FHL2Q14192 279 aa15.73■□□□□ 0.11
U2AF1-202ENST00000380276 PCNPQ8WW12 178 aaKnown RBP15.73■□□□□ 0.11
U2AF1-202ENST00000380276 SLC25A2Q9BXI2 301 aa15.73■□□□□ 0.11
U2AF1-202ENST00000380276 LYRM1O43325 122 aa15.72■□□□□ 0.11
U2AF1-202ENST00000380276 TCRBP04435 133 aa15.72■□□□□ 0.11
U2AF1-202ENST00000380276 SRIP30626 198 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms