RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 K7EIM0 57 aa16.66■□□□□ 0.26
SKI-201ENST00000378536 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
SKI-201ENST00000378536 MED12LQ86YW9 2145 aa16.66■□□□□ 0.26
SKI-201ENST00000378536 DPH3Q96FX2 82 aa16.66■□□□□ 0.26
SKI-201ENST00000378536 CT83Q5H943 113 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 RIPPLY3P57055 190 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 A0A087WWL8 130 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 C14orf144Q96I85 54 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 LOC107984156A0A0G2JMH3 177 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 FAM231BA6NCW3 169 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 ADARB2-AS1A8MUL3 147 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 CDKN1BP46527 198 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 CRIP3Q6Q6R5 217 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 ARL17AQ8IVW1 177 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 IFI27L1Q96BM0 104 aa16.65■□□□□ 0.26
SKI-201ENST00000378536 CFAP161Q6P656 301 aa16.64■□□□□ 0.26
SKI-201ENST00000378536 DOCK11Q5JSL3 2073 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 CCL24O00175 119 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 MS4A6AQ9H2W1 248 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 TNRC6AQ8NDV7 1962 aaKnown RBP16.64■□□□□ 0.25
SKI-201ENST00000378536 VCYO14598 125 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 DPM2O94777 84 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 MALP21145 153 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 AMN1Q8IY45 258 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 KLK9Q9UKQ9 250 aa16.64■□□□□ 0.25
SKI-201ENST00000378536 CHTOPQ9Y3Y2 248 aaKnown RBP16.64■□□□□ 0.25
SKI-201ENST00000378536 KNCNA6PVL3 124 aa16.63■□□□□ 0.25
SKI-201ENST00000378536 FSTL3O95633 263 aa16.63■□□□□ 0.25
SKI-201ENST00000378536 CRPP02741 224 aa16.63■□□□□ 0.25
SKI-201ENST00000378536 LINC00574Q9H8X3 128 aa16.63■□□□□ 0.25
SKI-201ENST00000378536 PLCE1Q9P212 2302 aa16.63■□□□□ 0.25
SKI-201ENST00000378536 DEFB136Q30KP8 78 aa16.63■□□□□ 0.25
SKI-201ENST00000378536 DEFB130BP0DP73 79 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 DEFB130AP0DP74 79 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 RPL24P83731 157 aaKnown RBP16.62■□□□□ 0.25
SKI-201ENST00000378536 DYSFO75923 2080 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 SHANK1Q9Y566 2161 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 IGHV1OR15-1A0A075B7D0 117 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 ST6GALNAC6Q969X2 333 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 IGKV3D-20A0A0C4DH25 116 aa16.62■□□□□ 0.25
SKI-201ENST00000378536 FABP2P12104 132 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 LINC01559Q495D7 138 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 LY6G5BQ8NDX9 201 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 TEX22C9J3V5 150 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 UBE2CO00762 179 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 SNAI2O43623 268 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 CGB3P0DN86 165 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 CGB7P0DN87 165 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 C11orf52Q96A22 123 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 NCOR2Q9Y618 2525 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 CSTL1Q9H114 145 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 PRSS46E5RG02 174 aa16.61■□□□□ 0.25
SKI-201ENST00000378536 FAM231DQ6ZW35 169 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 C17orf77Q96MU5 243 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 HIST1H2BLQ99880 126 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 TRAV12-2A0A075B6T6 113 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 ATP6V0BQ99437 205 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 VGLL1Q99990 258 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 A0A087WX48 190 aa16.6■□□□□ 0.25
SKI-201ENST00000378536 MRPS16Q9Y3D3 137 aaKnown RBP16.6■□□□□ 0.25
SKI-201ENST00000378536 HIST3H2BBQ8N257 126 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 LAMTOR2Q9Y2Q5 125 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 INS-IGF2F8WCM5 200 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 SMKR1H3BMG3 65 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 CTSGP08311 255 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 CRYGCP07315 174 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 C11orf71Q6IPW1 123 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 AJUBAQ96IF1 538 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 ABCA1O95477 2261 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 IGKV1-17P01599 117 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 IGKCP01834 107 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 APOC4P55056 127 aa16.59■□□□□ 0.25
SKI-201ENST00000378536 A0A1B0GUS0 222 aa16.58■□□□□ 0.25
SKI-201ENST00000378536 TMEM213A2RRL7 107 aa16.58■□□□□ 0.25
SKI-201ENST00000378536 ODF3BA8MYP8 253 aa16.58■□□□□ 0.25
SKI-201ENST00000378536 ANXA2RQ3ZCQ2 193 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 OR2K2Q8NGT1 345 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 OR13C6PQ8NH95 151 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 DEFB104AQ8WTQ1 72 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 CACNA1AO00555 2505 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 SLURP1P55000 103 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 CTAG1AP78358 180 aa16.58■□□□□ 0.24
SKI-201ENST00000378536 LOC102724200A0A096LPH7 203 aaPredicted RBP16.57■□□□□ 0.24
SKI-201ENST00000378536 BCL6BQ8N143 479 aaPredicted RBP16.57■□□□□ 0.24
SKI-201ENST00000378536 RHODO00212 210 aa16.57■□□□□ 0.24
SKI-201ENST00000378536 CIDEAO60543 219 aa16.57■□□□□ 0.24
SKI-201ENST00000378536 FOXI2Q6ZQN5 318 aa16.57■□□□□ 0.24
SKI-201ENST00000378536 ZC2HC1AQ96GY0 325 aa16.57■□□□□ 0.24
SKI-201ENST00000378536 IGHG2P01859 326 aa16.57■□□□□ 0.24
SKI-201ENST00000378536 ARL6IP6Q8N6S5 226 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 MRPL53Q96EL3 112 aaKnown RBP16.56■□□□□ 0.24
SKI-201ENST00000378536 Q6ZPA2 131 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 LOC105371267A0A1B0GV96 52 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 TRAV9-2A0A087WT02 112 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 TRPT1Q86TN4 253 aaKnown RBP16.56■□□□□ 0.24
SKI-201ENST00000378536 V9GYV3 84 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 GAGE10A6NGK3 116 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 TNFRSF13BO14836 293 aaPredicted RBP16.56■□□□□ 0.24
SKI-201ENST00000378536 HLA-DMBP28068 263 aa16.56■□□□□ 0.24
SKI-201ENST00000378536 UBE2DNLQ8IWF7 75 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms