RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 BTN1A1Q13410 526 aa10.85□□□□□ -0.67
RAB4B-202ENST00000378307 PRR9Q5T870 116 aa10.85□□□□□ -0.67
RAB4B-202ENST00000378307 TMEM88Q6PEY1 159 aa10.85□□□□□ -0.67
RAB4B-202ENST00000378307 TMEM263Q8WUH6 116 aaKnown RBP10.85□□□□□ -0.67
RAB4B-202ENST00000378307 LINC00477Q96M19 166 aa10.85□□□□□ -0.67
RAB4B-202ENST00000378307 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
RAB4B-202ENST00000378307 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
RAB4B-202ENST00000378307 NOP10Q9NPE3 64 aaKnown RBP10.85□□□□□ -0.67
RAB4B-202ENST00000378307 KLLNB2CW77 178 aa10.84□□□□□ -0.67
RAB4B-202ENST00000378307 GIPP09681 153 aaPredicted RBP10.84□□□□□ -0.67
RAB4B-202ENST00000378307 Q9H3A6 140 aa10.84□□□□□ -0.67
RAB4B-202ENST00000378307 TIMM8BQ9Y5J9 83 aaPredicted RBP10.84□□□□□ -0.67
RAB4B-202ENST00000378307 RNF222A6NCQ9 220 aa10.83□□□□□ -0.68
RAB4B-202ENST00000378307 G3V3Q6 166 aa10.83□□□□□ -0.68
RAB4B-202ENST00000378307 HMGB3O15347 200 aaKnown RBP10.83□□□□□ -0.68
RAB4B-202ENST00000378307 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
RAB4B-202ENST00000378307 M6PRP20645 277 aa10.83□□□□□ -0.68
RAB4B-202ENST00000378307 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
RAB4B-202ENST00000378307 ZNF493Q6ZR52 646 aa10.83□□□□□ -0.68
RAB4B-202ENST00000378307 ZFAND2AQ8N6M9 145 aa10.83□□□□□ -0.68
RAB4B-202ENST00000378307 NACAE9PAV3 2078 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 C7orf71A4D174 169 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 CRISP2P16562 243 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 ATP6V0CP27449 155 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 RNASE4P34096 147 aaKnown RBP10.82□□□□□ -0.68
RAB4B-202ENST00000378307 RGS21Q2M5E4 152 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 ACOT6Q3I5F7 207 aaPredicted RBP10.82□□□□□ -0.68
RAB4B-202ENST00000378307 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 POM121L12Q8N7R1 296 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 HSD17B11Q8NBQ5 300 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 Q8TAT8 98 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 FAM210BQ96KR6 192 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 ZNF492Q9P255 531 aa10.82□□□□□ -0.68
RAB4B-202ENST00000378307 CBY3A6NI87 242 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 TAS2R45P59539 299 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 LYPD1Q8N2G4 141 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 OR10G4Q8NGN3 311 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 OR10G7Q8NGN6 311 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 PYGO2Q9BRQ0 406 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 SH3BGRL3Q9H299 93 aa10.81□□□□□ -0.68
RAB4B-202ENST00000378307 DIRC3C9JPN6 131 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 F5H768 121 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 GPX1P07203 203 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 P0DMU3 169 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 FAM231AP0DMU4 169 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 FAM231CP0DMU5 169 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 CCDC28AQ8IWP9 274 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 OR2G3Q8NGZ4 309 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 TP53TG3Q9ULZ0 132 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 TNFSF18Q9UNG2 199 aa10.8□□□□□ -0.68
RAB4B-202ENST00000378307 FXYD6-FXYD2A0A087WZ82 144 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 A0A1W2PPV4 95 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 PGPA6NDG6 321 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 ATP5G1P05496 136 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 NMBP08949 121 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 ATP5G3P48201 142 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 ZNF138P52744 262 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 ZNF266Q14584 549 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 RPL7L1Q6DKI1 246 aaKnown RBP10.79□□□□□ -0.68
RAB4B-202ENST00000378307 OR2T35Q8NGX2 323 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 HYLS1Q96M11 299 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 GSN-AS1Q9NRJ2 163 aa10.79□□□□□ -0.68
RAB4B-202ENST00000378307 HECTD4Q9Y4D8 3996 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 GAGE12BA1L429 117 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 GAGE7O76087 117 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 PQLC2Q6ZP29 291 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 Q6ZTI0 123 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 ASB13Q8WXK3 278 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 PSMG3Q9BT73 122 aaPredicted RBP10.78□□□□□ -0.68
RAB4B-202ENST00000378307 OTORQ9NRC9 128 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
RAB4B-202ENST00000378307 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 SNURFLB1AK76 121 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 SMLR1H3BR10 107 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 M0R2N4 97 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 STAG3L2P0CL84 134 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 STAG3L3P0CL85 134 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 ARL14EPLP0DKL9 152 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 HOXA5P20719 270 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 CSN1S1P47710 185 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 CDC34P49427 236 aaPredicted RBP10.77□□□□□ -0.69
RAB4B-202ENST00000378307 EIF4E3Q8N5X7 224 aaKnown RBP10.77□□□□□ -0.69
RAB4B-202ENST00000378307 INO80EQ8NBZ0 244 aaPredicted RBP10.77□□□□□ -0.69
RAB4B-202ENST00000378307 RPH3ALQ9UNE2 315 aa10.77□□□□□ -0.69
RAB4B-202ENST00000378307 GNG5P63218 68 aa10.76□□□□□ -0.69
RAB4B-202ENST00000378307 DAZ2Q13117 558 aaKnown RBP10.76□□□□□ -0.69
RAB4B-202ENST00000378307 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
RAB4B-202ENST00000378307 RXFP4Q8TDU9 374 aa10.76□□□□□ -0.69
RAB4B-202ENST00000378307 PKD1P98161 4303 aa10.76□□□□□ -0.69
RAB4B-202ENST00000378307 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms